Streptococcus parauberis: STP_0276
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Entry
STP_0276 CDS
T01504
Name
(GenBank) helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
stk
Streptococcus parauberis
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stk03019
]
STP_0276
03009 Ribosome biogenesis [BR:
stk03009
]
STP_0276
Enzymes [BR:
stk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STP_0276
Messenger RNA biogenesis [BR:
stk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STP_0276
Ribosome biogenesis [BR:
stk03009
]
Prokaryotic type
rRNA helicases
STP_0276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SWI2_SNF2
Helicase_RecD
Herpes_BLRF2
Motif
Other DBs
NCBI-ProteinID:
AEF24724
LinkDB
All DBs
Position
297349..298734
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AA seq
461 aa
AA seq
DB search
MSFKDYNFKQYIQDALDAIKFTEPTDVQKKLIPIVNSGRDLVGESKTGSGKTHTFLLPIF
EKLDEDLAQVQVLITAPSRELATQIFDAAKQIASHSDKEIRLVNYVGGTDKLRQIEKLKV
SQPHIVVGTPGRIYDLVKSGDLEIHKATTFVVDEADMTMDMGFLDTVDKIASALPKAVQI
LVFSATIPQKLQPFLKKYLTNPVIEQIKTQTVIADTIENWLVSTKGRDNNSQILSILQNM
NPYLAMLFVNTKERADELHSFLVANGLKVAKIHGGVPPRERKRIMNQVKKLDFQYIVATD
LAARGIDIEGVSHIINDAIPQDLSFFVHRVGRTGRNGMSGTAITLYKPSDDSDIKELEKL
GIQFVPKVLKNGQFEDTYDRDRRQSREKSYKKLDTEMIGLVKKKRKKLSQPIRKKFNGLL
MKSVVKNVVRKAVLRVVLNVNQRNKVSNLNKKIVQKGSLFL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaagattataattttaaacaatacattcaggatgccctggatgcaatcaag
tttactgaaccaactgatgttcagaaaaaacttattccaatcgttaattctggtcgtgat
ttagtaggtgaatcaaaaactgggtctggtaagactcatactttcttgttgccaattttt
gagaaattggacgaagatttagcacaagttcaagttttaatcacggcaccaagtcgtgaa
ttagctactcaaatttttgatgcagcaaaacaaattgcaagccattcagataaagaaatt
cgtttagttaactatgttggtggaacagataaactccgtcaaattgaaaaattgaaagtt
tctcaacctcatattgttgtggggacaccaggacggatttatgatttagttaaatcaggt
gatttagaaattcataaagcaacaacatttgttgttgatgaagctgatatgacaatggat
atgggattcctagacactgttgataaaattgcgtcagctcttccgaaagcggtacaaatt
ttagtcttttcagctactatcccacaaaaattacaaccatttttgaaaaaatatctaact
aatccagttattgaacaaattaaaactcaaacagtgattgcggatacaatcgaaaattgg
ttagtgtcaactaaaggtagagataataatagtcagattctgtccattctccaaaacatg
aatccctatttagctatgctatttgttaatacaaaagaaagagcagatgaacttcattct
ttccttgttgctaatggacttaaagtagctaaaattcatggtggtgttccgccaagagaa
cgtaaacggattatgaaccaagttaaaaagcttgactttcagtatatcgtagcgacagac
ctagctgcgcgaggaatcgacattgagggtgtgagtcacataatcaatgatgcaattccc
caagatttatcattctttgtgcaccgtgttggtcgtactggtcgtaatggtatgtcggga
acagctatcaccctttataagcctagtgatgattctgatattaaagaacttgaaaaatta
ggaattcagtttgtaccaaaagtgttgaaaaatgggcaatttgaagatacttatgatcgt
gatcgtcgtcaatcaagagaaaaatcatataagaagcttgatactgagatgattggtctt
gttaaaaagaaaagaaaaaagttaagccagcctataagaaaaaaattcaatgggttgttg
atgaaaagcgtcgtaaagaacgtcgtgcggaaggccgtgctaagggtcgtgctgaacgta
aatcaaagaaacaaagtttctaatctgaataaaaagatagtccaaaagggctctcttttt
ttgtga
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