Streptococcus parauberis: STP_0560
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Entry
STP_0560 CDS
T01504
Name
(GenBank) RNA pseudouridylate synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
stk
Streptococcus parauberis
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stk03009
]
STP_0560
Enzymes [BR:
stk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
STP_0560
Ribosome biogenesis [BR:
stk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STP_0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AEF25008
LinkDB
All DBs
Position
598735..599622
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AA seq
295 aa
AA seq
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MELIIKEAGSRLDKAIADLTELSRGQANDAIKAGIVLVNGQAAKAKYSVKAGDIITYEIQ
EEEVLDYQAEDIPLDVVYEDEDLAIINKPQGMVVHPSAGHSSGTMVNALLYQIKDLSGIN
GVVRPGIVHRIDKDTSGLLMVAKNDAAHQALADELKAKKSLRKYLAIVHGNLPNDRGIIE
APIGRSEKDRKKQAVIARGKEAVTRFQVIERFGDYTLVELTLETGRTHQIRVHMAYIGHP
VAGDPLYGPRKTLPGNGQFLHAQTLGLTHPRTGEVMTFTAEPPLIFQQTIEKLRK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggaattaataattaaagaagcaggcagtcgcttagataaagcgattgctgatttaaca
gagctatcacgaggccaagctaatgacgccattaaggctggtattgttttggtcaatggc
caagctgcaaaagcaaagtattctgtcaaagcaggtgatattattacctatgagattcag
gaagaagaagttctggattatcaagctgaggacattcctctggatgtcgtttatgaggat
gaagacctggcaataattaataagcctcaaggaatggtcgtccatccttcagctggtcac
agttcaggtacaatggttaatgccttgttatatcaaattaaagatttatcaggcattaat
ggtgttgtccgaccaggaatcgtccatcgtattgacaaggacacttcgggcttattgatg
gtagccaaaaatgacgccgcgcatcaggccttggcagatgaattgaaagcaaaaaaatca
ctcagaaaatatttggctatagtgcacggcaatttaccaaatgaccgtggaataattgag
gcaccaattggacgtagtgaaaaggaccgcaaaaagcaagcagttattgccagaggaaaa
gaggcagtaaccagatttcaagttattgaacggtttggtgactataccttggttgagcta
actttggaaacaggaagaacgcatcagatacgtgttcatatggcttacattggtcatcca
gttgctggtgatccactatatggaccgagaaaaactcttccaggcaatggacagtttcta
catgcccaaactttaggtttaacccatccacgtactggtgaagtcatgacttttacagca
gagccaccattaatttttcaacaaacgattgaaaagttacgaaaatag
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