Streptococcus parauberis: STP_0834
Help
Entry
STP_0834 CDS
T01504
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
stk
Streptococcus parauberis
Pathway
stk03030
DNA replication
stk03430
Mismatch repair
stk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STP_0834 (dnaE)
03430 Mismatch repair
STP_0834 (dnaE)
03440 Homologous recombination
STP_0834 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stk03032
]
STP_0834 (dnaE)
03400 DNA repair and recombination proteins [BR:
stk03400
]
STP_0834 (dnaE)
Enzymes [BR:
stk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STP_0834 (dnaE)
DNA replication proteins [BR:
stk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STP_0834 (dnaE)
DNA repair and recombination proteins [BR:
stk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STP_0834 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AEF25282
LinkDB
All DBs
Position
complement(878863..881967)
Genome browser
AA seq
1034 aa
AA seq
DB search
MFAQLDTKTVYSFMDSLVDLEHYFTEAKKLGYKTIGIMDKDNLYAAYHFITGCQKHGLQP
ILGLEIDYPSQDNLMTLFLIAQNNQGYKNLLKISTSKMSGEFNQIDLEHFKDGLVAIIPD
QANLQAIDLPLKTYFGVYPDTRSNPTDNPLIALRKVRYFSDNDRESLQTLHAIRDNVNLT
ETPLVEQGQFLDSVETVTDFFKVQFPDALKNLENLTSTISYHFDSQLKLPRFNREIPAKD
QLRQLTEEGLKKKNLWLPDYQVRLEKELQIISEMGFDDYFLIVWDLLRFGRSKGYYMGMG
RGSAAGSLVAYSLEITGIDPIKNDLLFERFLNKERYSMPDIDIDLPDIYRSEFLHYVRNR
YGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELSHLTKKIGFKDTLDSVYEKNISFRQ
FVNSRLEYQRAFEIAKRIEGNPRQTSIHAAGIVMSDDNLTDHIPLKLGDDMMITQYDAAA
VEANGLLKMDFLGLRNLTFVQKMKEKLFKDQGIDISIADINLEDSDTLALFARGDTKGIF
QFEQNGAISLLKRIKPVRFEEIVATTSLNRPGASDYTNNFIKRRNGQEVVDLIDPVIAPI
LESTYGIMLYQEQVMQIAQVFAGFSLGKADLLRRAMSKKNSAEMKKLESEFLAGATQLGR
SLETAKLLFKRMEKFAGYGFNRSHAFAYSALAFQLAYFKAHYPGIFFDVIMNYSNSDYIS
DALDSDFKVIPLSINNIPYTDKVEKNTILMGMKNIKGLPRDFAYWIIENRPFSGIESFMT
RIPEKYKKKEALIPLIQIGLFDQFEPNRKKVIENCEALLVFVNELGSLFADSSFSWVDAD
DYSNSEKYQLEQEIIGVGLSKHPLLALAEKTRKQFTPITKLVKDTDAEILVQIDSIRIIR
TKSNGQQMAFLSVTDTKKKFDVTIFPEQYAKVKDMLQEGQLYFISGRVKERDNRLQMILS
SIQFAQEKSYWILLKNHDQDALIANILDRYPGSVPVIIHYQESKETLAIDGKFIAITNDF
ENEIATIAMKTIYK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcacaattagatacaaaaacagtttattcattcatggatagtctggttgactta
gaacattattttacagaagcaaaaaaactaggctataaaacaataggtatcatggataag
gataacctttatgcagcttatcattttattactggttgtcagaaacatggcctccaaccc
attttaggtctagagatagattaccctagtcaagacaatttaatgaccctgtttttaatt
gctcaaaataatcaagggtataaaaatcttctgaagatttcaacgtccaaaatgtctggt
gaatttaatcaaatagacttagagcattttaaagatggtctagttgcaataattcccgac
caagcaaatctgcaagctatagacttaccattaaaaacatattttggagtctatccggat
actcgatcaaatccaacagataatcctctgatcgcattacggaaagtcagatatttctct
gataatgatcgagaaagtcttcaaaccttacatgctattcgtgataatgtaaacctgact
gaaacaccattagtagagcaaggtcaatttttagactctgttgaaacagtaacggatttc
tttaaagtgcaatttccagatgcattaaaaaatctcgagaatctcacatcgactatttca
tatcactttgattcacaactaaaattgccaagatttaatagggaaattcctgctaaggat
cagttaagacaattgaccgaagaaggactaaagaaaaagaacctttggttgcctgattac
caagtaagattagaaaaagaactgcaaattatttcagaaatgggctttgatgattatttc
ttaattgtctgggatttacttcgttttggacggagtaaaggttactacatggggatgggg
cgtggttcggcagcaggttctttagttgcatatagtcttgaaataactggaattgaccca
ataaaaaacgacttgctatttgaacgttttctaaacaaagaacgctatagtatgccagat
atcgatattgatttacccgatatttaccgaagtgaatttctacactatgttcgaaataga
tatggtagtgatcattctgctcaaattgtaaccttttcaacatttggacctaaacaagct
attcgagatgttttcaaaagattcggagtacctgaatatgaactgagccatttaaccaaa
aaaataggttttaaagatacacttgattccgtttatgaaaaaaatataagcttcagacaa
tttgttaatagtcgactcgaatatcaaagggcttttgaaattgctaagcgcattgaaggt
aatccaaggcagacgtcaattcatgctgcgggaattgtgatgagtgatgataatttaact
gaccacatccctttgaaacttggcgatgatatgatgattactcagtatgatgcagcggca
gttgaagccaatggcttattgaaaatggactttcttggcttacgcaatctgacttttgtt
caaaaaatgaaagagaaattgtttaaagatcaaggtattgatatttcgattgcggatatt
aatttagaagattctgataccttagcattgtttgcgcgtggtgatactaaaggtattttt
cagtttgaacaaaatggagctattagtttattgaagcggattaaacctgttcgctttgaa
gagattgttgcgacaacgtcattaaatcgtcccggtgccagtgattatacaaacaatttc
attaaaaggcgcaatggtcaggaggtcgttgatttaattgatcccgtaattgctcctatt
ttggaatcgacatatggcatcatgctctatcaagaacaagttatgcagatcgcacaagtc
ttcgcaggttttagtttaggcaaagccgatttattgcgccgagctatgtccaaaaaaaat
agtgctgaaatgaagaagctcgaatctgaatttttagctggtgctactcaattaggtcgt
tcacttgaaactgcaaagttgttatttaaacggatggagaagtttgctggttatggtttt
aacaggagtcatgcctttgcttattcagctttagcttttcaactggcctatttcaaagca
cattaccctggtattttttttgatgtcattatgaattactcaaatagtgattatatcagt
gatgctctggattctgattttaaagttatccctttaagtattaataatattccctatact
gataaagtggaaaaaaacaccattttaatggggatgaaaaatattaaaggtcttccaagg
gattttgcttattggattattgaaaatcgtccctttagtggaattgaaagctttatgact
agaattcctgaaaaatataagaaaaaagaagcactgattcctttgattcaaattggccta
tttgatcaatttgaacctaatcgaaaaaaagtaatcgaaaactgtgaagctttgcttgta
tttgtgaatgaacttggttctttatttgcggattcttcttttagttgggttgatgcagat
gattactcaaattctgaaaaatatcaacttgaacaagaaataataggggtgggtttgagt
aaacatcctctattagctttagctgagaagacgcgaaaacagtttacaccaatcacaaaa
cttgttaaagatacagatgctgagattctagtgcaaattgattctattcgaattatcaga
actaaaagtaatgggcaacaaatggcatttttatcggtgactgatacgaagaaaaaattc
gatgtgacaatcttcccagagcagtatgctaaggtcaaggacatgctacaagaaggccaa
ctctattttatatctggtcgagtaaaagagcgagacaatcgcttgcagatgatattatcc
tcaattcaatttgctcaggaaaagagttattggattttacttaaaaatcatgatcaggat
gctctaatagctaatattttagatagatatccaggatctgttccggttattattcactat
caagaatctaaggaaacgctcgcaattgatggtaagtttattgctatcacaaatgatttt
gaaaatgaaatcgctacaatcgcaatgaaaacgatttataagtaa
DBGET
integrated database retrieval system
