Streptococcus parauberis: STP_1470
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Entry
STP_1470 CDS
T01504
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
stk
Streptococcus parauberis
Pathway
stk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STP_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stk03019
]
STP_1470
03016 Transfer RNA biogenesis [BR:
stk03016
]
STP_1470
Enzymes [BR:
stk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STP_1470
Messenger RNA biogenesis [BR:
stk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STP_1470
Transfer RNA biogenesis [BR:
stk03016
]
Prokaryotic type
tRNA degradation factors
STP_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AEF25918
LinkDB
All DBs
Position
complement(1646777..1649023)
Genome browser
AA seq
748 aa
AA seq
DB search
MSKQTFTTTFAGKPLVVEVGQVAKQANGATVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFEDGFRNEIQVINTVLSFDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYIDGEYIINPNKAQLEASLLELTVAGS
KEAINMVESGAKELSEDIMLEALLRGHKAIQELIAFQEEIVAAVGKEKAKVELLQVNADL
QAEIVEKYNADLQKAVQVEEKKAREAATEAVKETVKADYEAKFAEDESLSTIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKIDEIRPLDAQIDFLPKVHGSGLFTRGQTQALSVLTLA
PMGETQIIDGLDDEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPS
LEDFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITPQILEEALAQAKKARFEILDLI
QATIAEPRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDDEGTVQI
FSSDQVAINRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWT
RTANVSDVLELGEEVDVKVIKVDEKGRVDASMKALLPRPPKPEISENAQEGSADIPKERH
HGFKQHGSKPHHVDKAENVETNKEEKHD
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacatttacaacaacatttgctggtaaaccacttgttgttgaagttggt
caagtggcaaaacaagctaatggcgcaactgttgtccgttatggtgaatcaactgtttta
acagctgccgttatgtctaagaaaatggcgacaggtgatttcttcccactccaagtcaat
tatgaagaaaaaatgtatgcggcaggaaaattcccaggtggatttatgaaacgtgaaggc
cgtccttcaacggatgctaccttaacggctcgcctcattgaccgcccgatccgtccaatg
tttgaggatggcttcagaaatgaaatccaagttattaacactgtcctttcttttgatgaa
aatgctagcgcccctatggcagctatgtttggttcgtcattagctctttcaatttcagat
atcccattcaatggcccaattgctggagtacaagttggttacatcgatggagagtatatc
atcaacccaaataaagcacagcttgaagcttcgctattagaattaacggttgctggtagt
aaagaagccatcaacatggttgagtctggtgctaaagaattatcagaagatatcatgctt
gaagccttacttcgtggtcacaaagcaattcaagaattgattgccttccaagaagaaatt
gtagcagctgttggtaaagaaaaagcaaaagttgaattattacaagtcaatgctgattta
caagctgaaattgttgaaaaatacaatgcagatcttcaaaaagctgttcaagttgaagag
aaaaaagcccgtgaagcagcaactgaagctgttaaagaaacagtgaaagcagattatgaa
gctaaatttgctgaagacgaatctctttcaacaatcatgcgtgacgtggctgaaatcctt
gaacaaatggaacatgctgaagttcgtcgtttaatcactgaagataaagttcgtcctgat
ggtcgtaagattgacgaaatccgtcctttagacgcccaaattgacttcttaccaaaagta
catggttcaggtttatttacgcgaggacaaactcaagcattgtcagttttgactcttgct
ccaatgggtgaaactcaaataatcgatggtttagatgatgaatacaaaaaacgtttctta
caccattataatttcccacaatactcagttggtgaaacagggcgttatggagcagctgga
cgtcgtgaaattggtcatggtgctttaggtgaacgtgcccttgaacaagttcttccaagt
ttagaagacttcccatatgctatccgtttggttgctgaagtattagaatcaaatggttca
tcttcacaagcatcaatctgtgctggaacacttgccctgatggctggtggtgtgccaatt
aaagcaccggttgctggtattgccatgggtctaatctctgatggtacaaactatactgtc
ttaacagacatccaaggtttagaagatcactttggcgatatggactttaaggttgctggt
acacgtgaagggattactgctttacaaatggatatcaagattgaaggtattacaccacaa
attcttgaagaagcattagctcaagctaaaaaagcacgttttgaaatcttagacttgatc
caagcaacaattgctgaaccacgtccagaattagcaccaacagcaccaaaaattgacact
attaaaattgatgttgataaaatcaagattgtcattggtaaaggtggtgaaacaattgat
aagattattgctgaaacaggcgttaagattgatattgatgatgaaggtacagttcaaatt
ttctcaagtgaccaagtagccattaaccgtactaaagaaattattgctggtttagtccgc
gaagctaaagttggtgaagtctaccatgctaaagtagtccgtattgaaaaatttggtgcc
tttgttaacttatttgataaaacagatgcacttgttcatatttcagaaattgcatggaca
cgtacagctaatgtttcagatgttttagagttaggcgaagaagttgacgttaaagttatt
aaagttgatgaaaaaggccgtgtagatgcttcaatgaaagcattattaccaagacctcca
aaacctgaaatatctgaaaatgctcaagaaggttcagcagatatacctaaagaaagacac
cacggttttaaacaacatggtagtaaaccacaccatgttgataaagctgaaaatgtcgaa
acaaataaagaagaaaaacatgactaa
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