Streptococcus parauberis: STP_1651
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Entry
STP_1651 CDS
T01504
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
stk
Streptococcus parauberis
Pathway
stk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STP_1651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stk03019
]
STP_1651
Messenger RNA biogenesis [BR:
stk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
STP_1651
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
SIS_2
pre-PUA_NIP7
Motif
Other DBs
NCBI-ProteinID:
AEF26099
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Position
1891371..1893053
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AA seq
560 aa
AA seq
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MSNIDLKPNEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEEDLLGIDYVIPDYS
YIVDNLDRVKALVITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDTT
LYEINHNTELTFKNLSVTFFRTTHSIPEPLGIVIHTPQGKVVCTGDFKFDFTPVGDPADI
HRMAALGEDGVLCLLSDSTNAEVPTFTNSEKVVGQSILKIIEGIHGRIIFASFASNIYRL
QQAAEAAVKTGRKIAVFGRSMEKAIVNGIELGYINVPKGTIIEPNELKNYHANEVLIMCT
GSQGESMAALARIANGTHRQVTLQPGDTVIFSSSPIPGNTTSVNKLINAIQEAGVEVIHG
KVNNIHTSGHGGQQEQKLMLRLMKPKFFMPVHGEYRMQKVHAGLAMDTGVPKENIFILEN
GDVLALTSDTARRAGHFNAQDIYVDGNGIGDIGTAVLRDRRDLSEDGVVLAVATVDFKSQ
MILAGPDILSRGFIYMRESGDLIRESQRVLFNAIRIALKNKEASIQSVNGAIVNALRPFL
YEKTEREPIIIPMVLIPDEE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatatcgatttaaaacctaatgaagtcggcgttttcgccattggtggtctaggg
gaaatcgggaaaaacacatatggcattgagtatcaagatgagattatcattgttgatgct
ggtatcaaatttccagaagaagatcttctcgggattgattatgtaatccctgattattct
tacatcgttgacaatctcgaccgtgttaaagctttagttattacgcacggccatgaggac
catattggtgggattccattcctacttaaacaggctaatgttccaatttatgctgggcca
ttggctttagccttaattcgtggaaaattagaagagcatggtttgcttcgtgatacaacc
ctttacgaaatcaaccacaatactgagttaacctttaaaaacttgagcgtgactttcttc
cgtacaacccactcgattccagaacctttagggattgttattcatacgcctcaagggaaa
gttgtttgtactggtgactttaagtttgactttacgcctgttggtgatcctgcggatatc
catcggatggctgcgcttggtgaagatggcgtgctttgtctcttgtcagattcgacaaat
gcggaagttcctacttttactaactcagaaaaagtcgttggtcaatcaattctgaagatt
attgaaggcattcatggaagaattatcttcgcctcttttgcttcaaatatctaccgtttg
caacaagctgctgaagctgctgttaaaactggtcgtaagatcgcagtctttggacgttca
atggaaaaagcgattgtaaacgggattgaacttggttatatcaatgttcctaaagggaca
attattgaaccaaatgagttgaaaaattaccatgctaatgaagttttgattatgtgtact
ggtagccagggtgaatcaatggctgcgttagcacgtattgctaatggtacgcaccgtcag
gttacacttcaaccaggtgatacagttatcttctcatcaagtccaattcctggtaacacc
actagtgttaataaattgattaacgctatccaggaagctggtgttgaagtaattcatggt
aaagtaaacaacatccatacttcaggacacggtggtcaacaagaacaaaaattgatgctc
cgtttaatgaaaccaaaattctttatgcctgttcatggtgaataccggatgcaaaaagtc
catgctggtttagcaatggatactggtgttcctaaagaaaatatctttattcttgaaaat
ggtgatgttcttgccttaacaagtgatactgcacgtcgtgctggtcatttcaatgcgcaa
gatatctatgttgatggtaatggtattggtgacattggcacagctgttctacgtgaccgt
cgtgatttatctgaagacggtgtcgttttagcagttgcgactgttgactttaagtcacaa
atgattttagctggtccagacatcctcagccgtggatttatctatatgcgtgaatcaggc
gatctgattcgagaaagccaacgtgtcttatttaacgcaattcgaattgctttgaaaaat
aaagaagcaagcatccaatctgtaaatggtgcaattgttaatgctttaagaccattctta
tatgaaaaaacagaacgtgaaccaattattattccgatggtattaataccagacgaagag
taa
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