Streptococcus sp. KHUD_010: ABKA15_01045
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Entry
ABKA15_01045 CDS
T11611
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
stkh Streptococcus sp. KHUD_010
Brite
KEGG Orthology (KO) [BR:
stkh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stkh03019
]
ABKA15_01045
Messenger RNA biogenesis [BR:
stkh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABKA15_01045
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
XBS57321
UniProt:
A0AAU7Q048
LinkDB
All DBs
Position
192595..193539
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AA seq
314 aa
AA seq
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MKINQMKKDELFEGFYLIKSAELRQTRAGKNYLAFTFQDDTGTIEGKLWDAQPHNVEEFT
AGKVVHMQGRREVYNNTPQVNQITLRLPKVGEPNNPADFKEKPPVDVQELRDYLSQMIFK
IENPVWQRVVRALYAKYDKEFYSYPAAKTNHHAFEAGLAFHTATMVRLANAIGEIYPQLN
KSLLYAGIMLHDLAKVLELTGPEQTEYTVRGNLIGHIALIDEEITKVLAELKIDDTREDV
IILRHVLLSHHGLLEYGSPVRPKIMEAEIIHMIDNLDAEMMMMTSALALVGEGEMTNRIF
AMDNRSFYKPNFDK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaccaaatgaaaaaagacgagctatttgaggggttttacctcatcaaatcc
gctgaactgcgtcagacaagagctggaaaaaattatttggcatttacttttcaagatgac
acaggaacgattgaaggaaaattgtgggatgcacaaccacacaatgtggaagaatttact
gctgggaaagtcgttcacatgcaagggcgcagagaagtgtataacaacacccctcaagtc
aatcaaattaccttgcgattgcctaaagttggcgagccaaacaatccggctgattttaag
gaaaaaccaccggttgatgtccaagagttacgtgactatctctcgcaaatgatttttaaa
attgaaaatccagtttggcagcgtgtggtacgggctttgtatgctaaatacgataaagaa
ttttactcctatccagcagcgaaaaccaatcaccatgcttttgaggcaggacttgctttt
catactgcgactatggtgcggctagcaaatgctattggtgagatttacccgcaactaaat
aagagtttactttatgcaggaattatgctccatgatttagcaaaggtgctggaattgaca
ggcccagagcaaacagaatacactgttcgaggcaatctcatcggacacatcgctttgatt
gatgaagaaataacaaaagtgttggcagaattaaaaattgacgacactagagaagatgtc
attattctccgtcatgttttgctaagtcatcacggcctgttggaatacggtagtccagtg
cgtccgaaaatcatggaagctgaaattatccacatgattgataatttagatgcggaaatg
atgatgatgacttcggctctagccttggttggcgagggtgagatgaccaatcgaatcttt
gctatggacaaccgctctttctataagcctaattttgataagtaa
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