Streptococcus thermophilus LMG 18311: stu0986
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Entry
stu0986 CDS
T00213
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03420
Nucleotide excision repair
stl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
stu0986 (pcrA)
03430 Mismatch repair
stu0986 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stl03400
]
stu0986 (pcrA)
Enzymes [BR:
stl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
stu0986 (pcrA)
DNA repair and recombination proteins [BR:
stl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
stu0986 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
stu0986 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAV60646
UniProt:
Q5M4H1
LinkDB
All DBs
Position
886271..888598
Genome browser
AA seq
775 aa
AA seq
DB search
MRMENMMNPLLTGMNDQQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWN
ILAITFTNKAAREMRERAVALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPG
EQRTLMKRILKNLNLDPKKWNERAILGTISNAKNDLLDEIAYEHQAGDMYTQIVAKCYKA
YQEELRRSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLL
ASRFKNICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEV
IKNNRNRRPKKLWTQNDEGEQIVYYRANDERDEAVFVASTIDNIVREKVKNFKDFAILYR
TNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANTSDNISFERVVNEPK
RGVGPGTLEKLRNFAYEQNMSLLDASANIMLSPIKGKAAQGVYDFANMILNLRDQLDGLS
ITDTVEAILDKSGYLDALSMQQTLESQSRIENIEEFMSVTKNFDETNTDGTEDETGIDRL
GRFLNDLALIADTDDGEVEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEEPDE
LEEERRLAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLLQYQGLARPAN
SSFGVRFTKEEPIQFGQGMSLQQALQTRKANAQPQKHTGAQPFSKATGGLPFSKASDSGN
SATDWKIGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLASVAPIVKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
ttgagaatggagaatatgatgaacccattattaactggtatgaatgatcaacaagccgaa
gcagtccaaacgactgaaggccctcttttgattatggctggtgctggatcaggtaagact
cgtgtccttacccatcgcattgcctaccttatcgacgaaaaaatgatcaatccttggaat
attttggccattacctttaccaataaggctgcccgtgaaatgcgtgaacgtgcagtggct
ttaaatcccgcaacttcagaaaccttgattgcgaccttccatagcatgtgtgtacgaatc
cttcgtcgtgaagcggatcatattggctacaacagaaactttactattgtagatccagga
gaacaacgtactttgatgaaacgtattctcaagaatctgaatttagatcctaaaaagtgg
aatgaacgtgccattttagggaccatttctaacgccaaaaatgacctcttagatgagata
gcttatgagcatcaagctggtgacatgtatacgcaaatcgtagccaaatgttacaaggcc
tatcaagaagaacttcgtcgtagtgaggccatggatttcgacgatttgattatgatgact
cttcgtctctttgacaaaaatcccgatgtcctcgcttattatcagcaacgttatcagtac
attcacgtagatgagtatcaagataccaaccatgctcaataccaattggtaaaactccta
gcttcacgctttaagaatatctgtgtcgtgggtgatgctgaccaatcaatctatggatgg
cgtggagctgatatgcagaacattcttgattttgagaaggattatcctgaagctaaggtt
gtccttctggaagaaaactaccgttcaaccaagaaaattcttcaagcggctaacgaagtc
atcaagaacaaccgcaaccgccgtcctaagaaactttggactcaaaatgatgaaggtgaa
cagattgtttattaccgtgctaacgacgagcgtgatgaagctgtattcgtagcttcaaca
atcgataatatcgtccgtgaaaaagtcaagaatttcaaagacttcgctattctttaccgt
accaatgctcagtctcgtaccattgaggaagccttgctcaagtctaatattccatataca
atggttggtgggacaaaattctacagccgtaaagagattcgtgatgttatttcttatttg
aacttgattgccaacacttctgataacattagttttgaacgtgtcgtcaatgaacctaaa
cgtggagttgggcctggcacacttgaaaagcttcggaactttgcctatgagcaaaacatg
agtctcctagatgcttcagctaatatcatgttgtctcctattaaagggaaagcagctcaa
ggtgtttacgatttcgctaacatgattctgaacctacgtgatcagttggatgggctaagc
attaccgatactgtagaagctattttagacaagtctggttatctggatgctctgtccatg
caacaaacgcttgaaagccaatcacgcattgaaaatatcgaagagttcatgtctgtaaca
aagaatttcgacgagactaatacagatggaactgaagatgagacaggcattgaccgttta
ggccgtttcttgaatgatttggctttgattgctgacacggacgatggtgaggttgaggca
gcagaagtaaccttaatgaccctccacgccgccaaagggcttgaattcccagttgtcttc
ctaattggtatggaagaaggagtcttccctttgtcacgtgcttcagaagagccagatgaa
ctcgaagaagagcgtcgtttggcttacgtaggtatcactcgtgcggaagagattcttttc
cttaccaacgctaatacgcgtacgctttttggtaagactagctataatcgtcctagccgt
ttcttacgtgaaatttcagatgatttattacaatatcaaggtctagcacgtccagccaat
tcatcatttggtgttcgttttacaaaagaagagccgatacaatttggtcagggcatgagt
ttacaacaagcgcttcagaccagaaaagcaaatgcgcagccgcaaaaacatactggcgct
cagccattttcaaaagctactggaggactaccttttagtaaggcttcagactctggaaac
tcagctacagattggaaaatcggagatatcgctcaccacaagaaatggggagatggtacc
gtcctagaagtaactggaagtggcaagacacaggaacttaagataaaatttccagaagtt
ggacttaaaaaagtcttggcaagcgtagcacctattgtgaagaaatag
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integrated database retrieval system
