Streptococcus thermophilus LMG 18311: stu1394
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Entry
stu1394 CDS
T00213
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
stl
Streptococcus thermophilus LMG 18311
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stl03400
]
stu1394 (sbcC)
DNA repair and recombination proteins [BR:
stl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
stu1394 (sbcC)
Archaeal homologous recombinant proteins
stu1394 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
OVT1
ABC_tran
SpoIVA_middle
nSTAND_NTPase5
R1_ABCA1
Motif
Other DBs
NCBI-ProteinID:
AAV61009
UniProt:
Q5M3K7
LinkDB
All DBs
Position
complement(1224240..1227419)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPEDDLTKVTFYFQQGNHLYRIDRVLQQERAKQGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDSHFASQVWSEEELAVLASTPASEKLARL
EEFLSQRQESLTEQKSILKAAHEDLAQLQKSLQTAQDLAKIFQELEQAKERYRLEIEEGA
QGQAEAKVHLEELQFAQGLQETIRTLKQYRKQLMQLEQDLEIAQEALSEKQQAFEDVKAK
KEELTVQSKDFLQKEEELETWKENIIYAQSLAQEQEKIKRSTTNYKQLEETYQQARKEVE
MLNKSLSDLEANRLSLDSLHEAEKLFQIVGYSVENQLAQDLKEIENLNQELTKTEKRHQT
LSFDIDQAQEILKELEEELRRTLVSRRQLMIVQLQAELEEGHPCMVCGALEHPNFGGAQA
DEVALKNLMDQVEKLQAQKEKQVATLSNRQATLSEVASKRQDLLDQVAKVKATLEKHYQE
LEEHVKGRFDFDFSIDYETDRGQALLLKVEQYYQELQKRYDKEETDYIRYQDELGKAQKK
ATDLAKTYQEAKAVLDQAQERLEDLQEAHPELESVEVYQERISLAHQELNLYNKQVKENS
KAYNQLHADIKGIKGQIESITKSKDKVNQDVKRLSAELEQSLKAEGALANDLEQVELWLI
EVNNQAIPMLQAKLTTYATLKQELQAQIHKGQELLQNQEQPDLDSLAQAVQNCQEIYDRQ
LAQFSVMEKGLKDATATYQAAKTLQDSNQEVFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAISVLEQIGE
NRMVGVISHVDDMKEGIAQQLVIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccatatcgtaaggaagttattaat
ttcactcagtttgaccatgctcccctctttttgattggaggggacacaggggctggtaag
agtactctctttgatgccatgacggtagccttgtttgctacgaccagtggtgatcgtaat
gttgaggagatgcggtcaactttcgctggtccagaggatgatttgaccaaggtgactttc
tatttccaacaaggcaatcacctttatcgcattgaccgagttctccagcaagagagggcc
aagcagggtgggggcactaccatgcaaaaggcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgaccagatt
gagcagattttggggctcaatgctgagcagttcaaacagattatcctcttaccgcaaaat
gattttagccgttttttgaaggaagattccaagactaaaactcaaattttaaagaaaatc
tttgggacaggtatctttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagc
aataaggatatggataagcgtcaggctcagctagatagccactttgccagtcaggtttgg
tcggaggaagaattagctgtcttggcgtcaacgccagcctctgaaaaattggcacgtctt
gaagagtttttgtctcagcgtcaagaaagtcttacggagcaaaaaagtatcttgaaggct
gcccacgaggatttggcacaactgcagaagagcttgcaaactgcccaagatttggcaaag
atttttcaagaattggagcaagccaaggaacgttaccgtctggaaattgaggagggggct
caaggacaggcagaggcaaaagtgcatctggaggaattacagtttgctcaaggtctgcag
gaaaccattcggaccttgaagcagtatcggaaacagttgatgcaattagagcaggacctt
gaaattgctcaagaagccttaagtgaaaagcaacaggcgtttgaggatgttaaggctaaa
aaagaggaactcacagttcaatctaaggattttcttcaaaaagaagaggagcttgaaact
tggaaagagaatattatctatgcccagagtcttgcccaagaacaggagaaaatcaaacgt
tcaacgactaactacaagcagttggaagagacctatcagcaggctagaaaagaggttgag
atgcttaacaagtccttgtctgacttggaggctaatcgtcttagtttagatagtttacat
gaggccgaaaaactcttccagattgtgggctacagtgtggagaatcaacttgctcaggac
ctgaaagaaatagagaacttgaatcaggagttgacaaagaccgaaaaacgtcatcaaacg
ttatcttttgatattgatcaagctcaagaaattctcaaagaattggaagaggagttaaga
aggactttggtttcacgccgtcaactcatgattgtccaactgcaggcagagttagaggag
gggcatccttgtatggtttgtggtgctctggaacaccctaattttggtggagcacaggct
gatgaagtggccttgaaaaatctcatggatcaggtggagaagcttcaagctcaaaaagaa
aagcaagtcgctactttatcaaatcgtcaggctaccttgagtgaagttgcatctaaacgt
caggatttgcttgaccaagtggctaaagtcaaggcaactcttgaaaagcactatcaagaa
ttagaagagcacgttaagggacggtttgattttgatttttcgatagactatgaaactgac
cgtgggcaagccctactcctgaaggttgagcagtattatcaagagttacaaaaacgttat
gataaggaagagacagattatatccgatatcaagatgagctaggtaaggctcaaaaaaaa
gcgacagatttggctaaaacctatcaagaggccaaggcagtgcttgaccaagctcaagaa
cgcctagaggacttgcaggaagctcatccagaacttgagtctgttgaggtatatcaagaa
cggatttcccttgctcatcaggagctgaacctctacaataagcaagtcaaggaaaatagt
aaagcctacaaccaacttcatgccgacattaaaggaatcaaggggcagattgagagtata
actaagtctaaagataaggtaaatcaagatgttaagcgattatctgctgaattagagcaa
agtctcaaggctgaaggagccctcgccaatgacttagagcaggtcgaactctggcttatt
gaggtaaataatcaagctattcctatgcttcaggccaaattaacgacctatgcaacgctc
aaacaagaattacaggcgcagattcataaggggcaagagcttctccaaaatcaagaacaa
ccagatctcgatagtctagcgcaagcagtacagaattgtcaggaaatctatgataggcag
ctcgctcagttttctgtcatggaaaagggacttaaggatgcgacggctacctaccaagcg
gctaaaacccttcaagacagcaaccaagaggtctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtcttaatcttgaggtc
tacgttatccgtcagtatttccaacaaatcttggactatgccaatgctaactacatcgga
ctattaacggataaccgttattcctttgttctaagtgaggaaggacgcagggcgcgtgat
cacttcggtttggatatcaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgctgcactggccattgccctatccctctcagaa
gttgtccaaaataccagcaagggtgccgttgttgaagcactcttcatcgacgaaggtttc
ggttcacttgataaggaagccctcaccaaggctatctctgtcctagaacaaatcggtgaa
aatcgcatggtcggtgtcatcagccacgtggacgatatgaaagaaggtattgctcagcaa
ctagttatcatcaagtcgcacgatggcagtagccgtattaaaattgtggataaggggtag
DBGET
integrated database retrieval system
