Streptococcus thermophilus LMG 18311: stu1429
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Entry
stu1429 CDS
T00213
Symbol
priA
Name
(GenBank) primosomal replication factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
stu1429 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stl03400
]
stu1429 (priA)
Enzymes [BR:
stl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
stu1429 (priA)
DNA repair and recombination proteins [BR:
stl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
stu1429 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
SLFN-g3_helicase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AAV61042
UniProt:
Q5M3I6
LinkDB
All DBs
Position
complement(1262890..1265286)
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AA seq
798 aa
AA seq
DB search
MVLVAQIIVDVPLMQTDRPYSYLVPESMQGQITIGMRIHVPFGKGNRLLQGFVIGFGEQE
NVRNMPDLKPIAELLDYEPVLNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVI
MATDKLSEEERDIFLQGRDHILFSQLSKEQGQAIPRLVGSGRVTVDYIARDKQNIKTEKH
YSVQRGILETLDISQRAKKRLELRDFLLEKNEPGKLVDLHKLFSRDVVKFFIEAGALDIT
EVEVNRADSYFEKVEKTDFLELNAQQAHAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLH
LIERTLAMGKTAIVLVPEISLTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQ
AKVVVGARSAIFAPLDNIGAIIIDEEHEATYKQESNPRYHARDVALLRSKSHGAILVLGS
ATPSIESRARAQKGVYHFFELTERANPSAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIR
ERLARKEQVVLLLNRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAI
PNVCPNCQSRQIRYYGTGTQKAYDQLTELFPEARVIRMDVDTTRKKGAHEKLLETFGSGK
ADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAERTFQLLTQVAGRAGRADKEG
EVIIQTYNPSHYAIRFAQQQDYEGFYAYEMGIRRQLAYPPYFYTVGITLSHKDEEFVVRK
SYDVMACLREHLSDKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDSLEETLNRILDMTQE
PENKDLRLIIDHEPQNFT
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggttttagttgcacaaataattgtagatgttcctctaatgcagacggacaggccttat
agttaccttgtaccagaatccatgcaggggcaaattaccatcggtatgaggattcatgtg
ccttttggtaaaggaaatcgtctcttgcaagggtttgttattggctttggagagcaagaa
aatgtaagaaatatgccagacttgaagccaattgcggaacttttggattatgaaccagtc
cttaatcaggatcagctggatttggctgaccaaatgcgacacacggttttttcctataag
atttccatcttgaagtctatgcttccgggtctccttaattcacagtatgacaaagttatc
atggcaactgataaactgagcgaagaggagagggacatttttcttcaggggcgagaccat
attctcttctctcaattgtcgaaagaacaaggtcaagccattccgcgtttggtgggatct
ggtcgcgtaacggttgattacattgctagggataaacaaaatataaaaacggagaaacat
tatagtgttcaaagaggcattttagagactttggatatttcgcaacgagccaagaagcgg
ctggagttgcgggacttcttgttagaaaagaatgagcctggaaagttagtagacctgcat
aaacttttttctcgagatgtggtgaagtttttcattgaggctggagctctagacatcact
gaagttgaggtcaatcgtgctgatagctactttgaaaaggtagagaagacggattttcta
gagcttaatgctcagcaagcacatgctgttgaagtaatgacaggtcagattggtcatggt
gggaagccgttcttgttggaaggagtgacggggtcaggtaagactgaggtttacctgcat
cttattgagagaaccttggctatgggaaaaactgccattgtcttggttccagaaatttct
ctgacgccacaaatgaccaatcgtttcatctcccgttttggtgacttggtagcaatcatg
cattcaggcttgtcagatggtgaaaaatttgacgagtggcgtaaggttaggtctggtcaa
gcaaaggtcgttgtaggagcacgttctgctatctttgctcccttggacaatattggagca
atcattatcgatgaggagcacgaggcgacctataagcaggaatccaatcctcgctatcat
gctagagatgtggccttgcttaggtccaaaagccatggcgctattcttgtacttggttca
gccacgccttctattgagtcgcgagcgagggctcagaaaggggtctaccatttttttgaa
ttgacggagagggccaatcctagtgctaaaattccgcaggttgaagtggtggactttaag
gactttgtcggtagacaagaggcgagtgattttacgccacctctcttggagaaaatccga
gagcgattggcacgtaaggaacaagtcgttttgttgttgaatcgtcgtgggtattcttca
tttgtcatgtgtcgtgactgtggctatgtggatgactgtccgaactgtgatatttcactg
actttgcatatggataccaagaccatgaattgtcactactgtgattttcaaaaagctatt
cctaatgtctgtcctaattgccagagtcgtcagattcgctattatgggactgggacacag
aaggcttatgatcaattgacggaactttttccagaagccagagtgattcgtatggatgtt
gatactacacgtaaaaaaggcgctcacgagaaacttttagagacttttgggagtggcaag
gctgatattctgctaggcactcaaatgattgccaagggtttggattttcccaatgttacc
ttggtaggggtcttaaatgcggatacgtcgctaaatttaccagattttcgttcggctgag
cgcactttccagctgttgactcaggtggctggtcgtgctggtcgtgcggacaaggaaggg
gaggttattattcagacctataaccctagtcattatgccattcgttttgctcagcaacag
gattatgagggattctatgcctatgagatggggattcgccgtcagttggcctacccgcca
tatttttatacggtagggatcactctttcccacaaggatgaagagtttgtagtccgtaag
agctatgatgtcatggcttgtttaagagaacatttgtcggacaaggtgactttcttggga
ccaacaccaaaacctattgcccgaacacataacctttatcattatcagattattatcaaa
tatcgttttgaggatagcttggaagagacgcttaataggatccttgatatgactcaggaa
cctgaaaataaggatctacgtttgattatcgatcatgagcctcagaattttacctaa
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