Entry |
|
Symbol |
rheA
|
Name |
(GenBank) ATP-dependent RNA helicase
|
KO |
|
Organism |
stl Streptococcus thermophilus LMG 18311
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:stl00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
stu1568 (rheA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:stl03019]
stu1568 (rheA)
03009 Ribosome biogenesis [BR:stl03009]
stu1568 (rheA)
Enzymes [BR:stl01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
stu1568 (rheA)
Messenger RNA biogenesis [BR:stl03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
stu1568 (rheA)
Ribosome biogenesis [BR:stl03009]
Prokaryotic type
rRNA helicases
stu1568 (rheA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(1384986..1386572)
|
AA seq |
528 aa
MKFTDLNLSEDIQSAVVAAGFEQPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIHTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRIIRDFKNGQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQSKKKVALKKIERDFADEAIHANFDKFKDDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKNNSRDFENRGNKRPHRASSEKKNGFVIRNKGDK |
NT seq |
1587 nt +upstreamnt +downstreamnt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaacaaccatcacctatccaagagttgacaattccacttgctcttgaaggtaaggat
gtcattggtcaggcacaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcatacagaagaaaatacaattcaagccctggttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggccgtgataagggcgttaaggtt
cgctcagtatacggtggttctagcatcgagaaacaaatcaaggccctccgttcaggtgcc
cacattgtagtagggacaccaggtcgtctcctagaccttatcaaacgtaaagcccttaaa
cttaacaatatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
ctagaagacattgaagcaattatcagtcgagtaccagaggaacgtcaaacccttctcttc
tcagcaactatgcctgatgccatcaaacgtattggtgttcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaggaattgaccaatgttaacgttgatcaatactttatccga
gtgaaggaacaagagaagtttgatactatgactcgtcttatggatgttgaccaacctgaa
ttgtcaatcgtctttggacgtaccaaacgtcgtgtggacgagttaacacgtggtttgaaa
cttcgtggtttccgtgcagaaggtatccacggagaccttgaccaaaacaaacgtcttcgt
attatccgtgacttcaagaacggccaaatcgatatcttggttgcaacagatgttgcggcg
cgtggtcttgacatttcaggtgttactcacgtctacaactacgatattccacaagaccca
gaaagctacgttcatcgtattggacgtacaggccgtgcaggccaatcaggtcaatcgatt
acgttcgtttctccaaacgaaatgggttacttgggcatcatcgaaaatttgactaagaaa
cgcatgaaaggccttaagccaccaacagctcaagaagccttccaatctaagaagaaagtt
gcccttaagaaaattgaacgtgactttgcggatgaagctatccatgctaactttgacaag
tttaaggacgatgctgttaaattggctcaagaattcacacctgaagaattggcgctttat
atcttgagcttgaccgttcaagatccagagacaatgccagaagtggaaattgcgcgtgaa
aaaccattgccatttaaaccatcaggtggtggctttggtggtaaaggtggcaaaggtggc
cgtggtaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgt
gatgatcgagacggtggccgtcgagacttcaaacgcaagtctaagaataacagtcgtgac
ttcgaaaatcgtggcaacaaacgcccacaccgtgcttcaagcgaaaagaaaaatggcttt
gttatccgtaacaagggtgataagtaa |