Streptococcus thermophilus LMG 18311: stu1774
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Entry
stu1774 CDS
T00213
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
stu1774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stl03019
]
stu1774
Messenger RNA biogenesis [BR:
stl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
stu1774
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AAV61373
UniProt:
Q5M2N3
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All DBs
Position
1582808..1584490
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AA seq
560 aa
AA seq
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MASKINLKPEEVGVYAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDY
SYIVENVDRVKALVVTHGHEDHIGGIPFLLKQANIPIYAGPLALALIKGKLEEHGLLRDA
QLYEINANTELTFKNMSVTFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVGEPAD
LHRMAALGEEGVLCLLSDSTNAEVPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFR
LQQAAEAAVKTGRKIVVFGRSMEKAIVNGVELGYIKVPKGTIIDPSEMKNYHASEILILC
TGSQGEPMAALARIANGMHRQVTLQPGDTVIFSSSPIPGNTTSVNRLINTIQEAGVDVIH
GKINNIHTSGHGGQQEQKLMLRLIKPKFFMPVHGEYRMQKVHADLAVDCGVPKENIFIME
NGDVLALTKDSARRAGHFNAQDIYVDGNGIGDIGAAVLRDRRDLSGDGVVLAVATVDFKS
KMILAGPDILSRGFIYMRESGDLIRDSQRILFNAIRIALKNKDASIQSVNGAIVNALRPF
LYEKTEREPIIIPMILTPDN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaatcaatctaaaacctgaagaagttggggtttatgcgattggtggtttg
ggagaaatcggtaaaaatacctatggtattgaataccaggatgaaatcatcatcgtcgat
gcgggtattaaattccctgaagatgatcttctcggtatcgattatgtcatcccggactat
tcttacatcgttgaaaacgttgaccgtgttaaggctcttgtcgttactcacggtcacgaa
gaccatattggtggtatccccttccttcttaaacaggcaaatatcccaatctatgcagga
ccacttgctcttgctcttatcaaaggaaaattggaagaacacggactactacgtgatgca
caactctatgaaattaacgctaatacagagcttactttcaaaaatatgagcgtaaccttc
ttccgcacaactcactcaattccagaacctctcggaattgtcatccatacaccacaaggt
aaaattgtttgtaccggtgactttaagttcgacctcactccagtaggtgagccagcagac
cttcatcgtatggctgcactcggtgaagaaggcgttctttgcctcctctcagactcaacc
aatgctgaagtcccaactttcactaattccgagaaggtcgttggacaatccatcatgaaa
ataattgaaggcattcacggacgtattatcttcgcctcatttgcctctaatattttccgt
cttcaacaagctgctgaggctgctgtaaaaaccggtcgtaagattgttgtctttggacgt
tctatggagaaagccattgttaatggtgttgaactaggctatatcaaagttccaaaagga
actattattgatcctagtgaaatgaaaaactatcatgccagtgagattcttatcttgtgt
accggttctcaaggggagcctatggcggcccttgcacgtattgccaatggtatgcaccga
caagtaacactacaacctggtgacaccgttatcttctcatctagccctatcccaggaaat
acaaccagcgttaaccgtttgattaataccattcaagaagcgggtgtagatgttattcac
ggtaaaatcaacaatatccatacctctggtcacggtggtcaacaagagcaaaaactaatg
cttcgcttgatcaaaccaaaattcttcatgcctgttcatggtgaataccgcatgcaaaag
gtccacgcagatctcgctgttgattgtggtgttccgaaagagaatatctttatcatggaa
aatggtgatgtcttagccctaacaaaagattctgctcgtcgtgcaggtcatttcaatgct
caagacatctatgtcgatggtaatggtatcggtgatattggggcagccgttcttcgtgac
cgtcgtgatctctctggagatggtgtcgtccttgctgtcgcaactgttgatttcaagtct
aagatgattctagctggtccagatattctcagtcgtggatttatctatatgcgtgaatct
ggtgatcttattcgtgatagccaacgcattctattcaacgctattcgtattgctcttaaa
aataaagacgccagcattcaatccgttaacggagctatcgtcaatgcattacgaccattc
ctatacgaaaaaacagaacgtgagccaattatcattcccatgattctcacacctgataac
taa
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