| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase B prime subunit
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| KO |
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| Organism |
stl Streptococcus thermophilus LMG 18311
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:stl00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
stu1867 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:stl03021]
stu1867 (rpoC)
03400 DNA repair and recombination proteins [BR:stl03400]
stu1867 (rpoC)
Enzymes [BR:stl01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
stu1867 (rpoC)
Transcription machinery [BR:stl03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
stu1867 (rpoC)
DNA repair and recombination proteins [BR:stl03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
stu1867 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1660092..1663730)
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| AA seq |
1212 aa
MVDVNRFKSMQITLASPTKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKETPLERKSLLTEREYREKLQEYGQGSFVAKMGAEAIQDLL
KQVDLEAEIAELKEELKTATGQKRFKAVRRLDVLDAFYKSGNKPEWMVLNILPVLPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELGAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
LMAIELFKPFVMREIVAREYAGNVKAAKRMVERGDERIWDILEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLLLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDEGREGEGMIFKDIDEAVMAYHNGYVHLHSRVGI
AVDSMPDKPWKENQLHKILVTTVGKILFNSIIPSEIPYLQETTNENLTDSTPDKYFLEPG
QDIQTVIDSLEINAPFKKKHLGNIIAEIFKRLRTTETSAFLDRLKDLGYYYSTLAGLTVG
IADIPVIDNKQEIIDAAHHRVEEINKAFRRGLMTEDDRYVAVTTTWREAKDALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETL
EERLFGRYTKKSVKHPETGEVIVGPDTLITEDMAAAIVNAGVEEVTIRSVFTCKTRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKVEVGDE
VHRGEALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGVPATSRPVLLGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLIGLKENVIIGKIIPAGTGMARYRNIEPLAVNEVEVIENI
AVDEAIVESSED |
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| NT seq |
3639 nt +upstreamnt +downstreamnt
gtggttgacgtaaatcgatttaaaagtatgcaaattacactagcttcaccaactaaggtc
cgttcatggtcttacggtgaggttaagaaacctgaaacaatcaactaccgtacgctcaaa
cccgaacgtgaaggtctgttcgacgaagtgatctttggtcctactaaagactgggaatgt
gcgtgtgggaaatacaaacgtatccgttataaagggatcgtttgtgaccgctgtggtgtt
gaagtaacacgtgctaaggttcgtcgcgaacgtatgggtcacatcgagttgaaagcacca
gtatcacatatctggtacttcaagggaatcccttctcgtatgggattgactttggatatg
agtcctcgtgcacttgaagaagttatttacttcgcagcttacgtggttatcgatccaaag
gaaacaccgcttgagcgaaaatctctcttgactgaacgtgaatatcgtgaaaaattgcaa
gagtatggtcagggttcatttgtcgctaaaatgggtgcagaagctatccaagatctcttg
aaacaagtagatttggaagccgaaattgctgaactcaaagaagagttgaagacagcaact
ggtcaaaaacgttttaaagcagttcgtcgtttggacgttcttgatgccttttacaagtct
ggtaataaaccagaatggatggtgcttaacatattgccagtattgccaccagatcttcgt
ccgatggttcaattggacggtggacgttttgcagcatctgacttgaacgacctctaccgt
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgagttgggtgctccaggtatc
atcgtgcaaaacgaaaaacgtatgttgcaagaagcggtagacgctcttattgataatgga
cgtcgtggtcgtccaattactggaccaggtagtcgtccacttaaatctttgagccacatg
cttaaaggtaaacaaggtcgtttccgtcaaaacttgcttggtaaacgtgtcgacttctct
ggccgttccgttattgccgttggtccaacacttaaaatgtatcaatgtggtgtgccccgt
ttgatggccatcgaacttttcaaaccatttgttatgcgtgaaatcgttgcgcgtgaatac
gcaggtaacgtgaaagctgctaaacgtatggttgagcgtggtgatgaacgtatttgggat
attcttgaagatgttatcaaggaacacccagtgcttcttaaccgcgcacctaccctccac
cgtttgggtatccaggcctttgaacccgtcttgattgatggtaaggctcttcgtcttcac
ccattggtatgtgaggcctacaatgccgactttgacggtgaccaaatggccatccacgtt
ccattgtctgaagaagctcaagctgaagcacgtttgctccttcttgcggcagaacacatc
cttaaccctaaagacggtaaaccagtcgtaacaccatctcaggatatggttcttggtaac
tattacttgacaatggaagatgaaggccgtgaaggtgaaggtatgatcttcaaggatatt
gatgaggcagttatggcttatcataatggttatgttcacttgcatagccgtgtaggtatt
gcagtcgatagcatgcctgataaaccttggaaagaaaaccaacttcacaaaatcttagta
acaactgttggtaagattctcttcaactcaatcattccatcagaaattccatatcttcaa
gaaacaacaaatgagaacttgacagatagtacaccagataaatacttccttgaaccgggc
caagatatccaaacagttatcgatagtttggaaattaatgcgccattcaagaagaaacat
cttggtaacatcattgctgaaatcttcaaacgtcttcgtacaactgaaacatcagctttc
cttgaccgtttgaaagaccttggttactactactcaacacttgctggattgacagtgggt
atcgccgatatcccagttattgataacaaacaagaaattatcgatgctgctcaccaccgt
gttgaagaaattaacaaagctttccgtcgtggtttgatgacagaagatgaccgttatgtt
gctgttacaacaacatggcgtgaagcgaaagatgcacttgaaaaacgtctgattgagaca
caagatcctaagaatccaatcgttatgatgatggactcaggagctcgtggtaacatctct
aacttctctcaacttgccggtatgcgtggtttgatggctgctcctaacggacgtatcatg
gaattgcctatcctttcaaacttccgtgaaggtttgagcgttttggaaatgttcttctct
actcacggtgcgcgtaaaggtatgaccgatacagcccttaagactgccgactctggttac
cttactcgtcgtttggttgacgttgcccaagacgttatcattcgtgaagacgattgtgga
actgaccgtggtcttgttattcgtgccattactgatggtaaagaagtaacagaaactctt
gaagaacgtctttttggtcgttacactaagaaatctgttaaacatcctgaaactggcgaa
gttatcgttggtccagatactttgattactgaagatatggctgcagctattgtcaatgct
ggtgttgaagaagtaactatccgttcagtctttacatgtaagactcgtcacggtgtctgt
cgtcactgttacggtatcaacttggcaacaggtgatgcggttgaagttggtgaagcagtt
ggtactatcgctgcccaatctatcggggaaccaggtacacagcttaccatgcgtaccttc
cacaccggtggggtagcctcaaacaccgatatcacacagggtcttccacgtatccaggaa
atctttgaagcacgtaaccctaaaggggaagcggttatcactgaagttaagggtactgtt
atcgaaatcgaagaagatgctgcgacacgtactaagaaagtcttcgttcaaggtaagact
ggaatgggtgaatatgtcgttccatttacagctcgtatgaaagtagaagttggtgacgaa
gtacaccgtggtgaggccttgacagaagggtcaatccaaccgaaacgtctccttgaagta
cgtgataccttgtcagttgaaacttatcttcttgcagaagtgcaaaaagtttaccgtagc
caaggggtagaaatcggtgacaaacacgtcgaagtaatggttcgtcaaatgcttcgtaaa
gtacgtgttatggatccaggtgatacagatctccttccaggtacacttatggacatttct
gacttcacagatgctaacaaggatattgttatctctggtggtgttcctgcaacatctcgt
ccagtccttcttggtattactaaagcctcacttgaaacaaattcattcttatcagcggct
tccttccaagaaacgacacgtgtgcttacagatgcagctatccgtggtaagaaagatcat
cttattggtcttaaagaaaatgttatcattggtaagattatccctgctggtacaggtatg
gctcgctaccgtaacattgaacctcttgcagttaacgaagttgaagttattgaaaacatt
gctgttgatgaagcaattgtggaatcatctgaagactaa |
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