Streptococcus thermophilus LMG 18311: stu1908
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Entry
stu1908 CDS
T00213
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
stu1908 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stl03021
]
stu1908 (rpoA)
03400 DNA repair and recombination proteins [BR:
stl03400
]
stu1908 (rpoA)
Enzymes [BR:
stl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
stu1908 (rpoA)
Transcription machinery [BR:
stl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
stu1908 (rpoA)
DNA repair and recombination proteins [BR:
stl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
stu1908 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SusF_SusE
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
AAV61506
UniProt:
Q5M2D9
LinkDB
All DBs
Position
complement(1697239..1698177)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPIITKIDENKDYGKFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTVPGVREDVMQIILNIKGLAVKSYVEDEKTIELDVQGPAEVTAGDILTDSDIEIVN
PDHYLFTIAEGASFQATMTVSTNRGYVPAEENKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIVTNGTIIPEDALGLSARILIEHLNLFTDLTDVAKATDVMKETEK
VNDEKLLDRTIEELDLSVRSYNCLKRAGINTVHDLTEKTEPEMMKVRNLGRKSLEEVKVK
LADLGLGLKNDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaaa
tttgtcatcgaaccactagaacgtggttatggtacaactttgggtaactctcttcgtcgt
gtactcttgtcatcacttccaggtgctgccgtaacatcaattaaaattgatggagtgctc
cacgagtttgataccgtaccaggcgtccgtgaagacgtgatgcaaattatccttaatatt
aagggacttgctgtaaaatcttacgtcgaagacgaaaaaacaattgaacttgatgttcaa
ggtccagctgaggttactgctggagatatcttgactgatagtgacattgaaattgttaac
cctgatcattatctttttactatcgctgagggtgcttcattccaagcaacaatgacagta
tctacaaaccgtggttatgttccagcagaagaaaataaaaaagatgatgcaccagtggga
actttggctgtagattcaatctacacaccagtgaaaaaagtcaattatcaagttgaacct
gctcgtgtaggtagcaatgatggttttgataaattgacaatcgaaatcgtgacaaacgga
acaatcatcccagaagatgccctcggtctctcggctcgaattttgattgaacacttgaat
ttgtttacggatcttactgatgtggctaaagctacagatgtgatgaaggaaactgaaaaa
gtgaacgatgaaaaattgcttgatcgtaccatcgaagaacttgatttgtctgtacgctca
tataactgtttgaaacgtgccggtatcaataccgttcatgatttgacagagaagactgag
cctgaaatgatgaaagtccgtaacctaggtcgtaaatcacttgaagaagtcaaagttaaa
ttggctgatcttggacttggacttaaaaatgataaataa
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