Streptococcus thermophilus LMG 18311: stu1999
Help
Entry
stu1999 CDS
T00213
Symbol
holB
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
stl
Streptococcus thermophilus LMG 18311
Pathway
stl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
stl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
stu1999 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stl03032
]
stu1999 (holB)
Enzymes [BR:
stl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
stu1999 (holB)
DNA replication proteins [BR:
stl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
stu1999 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
THD_CWZF3-5-7
Motif
Other DBs
NCBI-ProteinID:
AAV61593
UniProt:
Q5M253
LinkDB
All DBs
Position
complement(1764167..1765528)
Genome browser
AA seq
453 aa
AA seq
DB search
MAEAQELRVQPHDLVAEQSVLGAIFINPEKLITVREFIEADDFYKYSHRVIFKAMVTLSD
RNDAIDATTVRTILDDQDDLQNIGGISYLVDLVNSVPTSANAEYYAKIVAEKAMLRRIIN
RLTEIINQAYEGTTESDEIIANAEKALVDVSEHSNSSGFRKISEVLDVNFNTLEMRSQQT
SDVTGLPTGFRDLDKITTGLHPDQLIILAARPAVGKTAFVLNIVQNVGTKQNKAVAVFSL
EMGAESLVDRMLAAEGMIDSHALRTGQLTEQDWNNVMIAQGALAEAPIYIDDTPGIKITE
IRARSRKLSQEVEGGLGLIVIDYLQLITGTRPENRQQEVSDISRQLKILAKELKVPVIAL
SQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYRDDYYRKESEESENAIEDNTIEV
ILEKNRAGARGTVKLLFQKEYNKFSSIAQFEES
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagctcaagaattacgagtgcaacctcatgatttagtagcggaacagtctgtt
ttgggggctattttcattaacccggaaaagttaattacggttcgagagtttatcgaagca
gatgacttttacaagtattcccatcgtgtcatttttaaagcaatggtaacgctgtcggat
cgaaatgatgctattgatgccacgacagtacgtactattttagatgaccaagatgacctc
caaaacatagggggtatttcttatcttgtagatttggtcaatagtgtcccaacatccgca
aatgctgagtactatgctaagattgtggctgagaaagccatgcttcggcgtattataaat
aggttgacagaaattatcaatcaagcatatgagggcacaactgaatcggatgaaattatc
gcaaatgctgagaaagccttagttgatgtttcagagcatagcaatagtagtggtttccgc
aaaatatctgaagttcttgatgtcaattttaatactttggagatgcgttcacagcaaaca
tcagatgtaactggattaccgacaggtttccgtgaccttgataagattacaacaggttta
cacccggatcaattaattattttagcagctcgtcccgctgttggtaaaacagcctttgtg
ttgaatatcgttcagaatgttggtaccaagcaaaataaagctgttgcagttttttcccta
gagatgggtgcagaaagcttggttgatcgtatgttggcagctgaaggtatgattgattct
catgctttacgtacaggtcaattgacagagcaagattggaataatgtcatgattgctcaa
ggggcactggctgaggcacctatttacatagatgatacccctggtataaagattactgag
attcgtgcacggtcccgtaaattgtcacaagaagtagagggtggtctcggtctcattgtg
attgactatttgcagttgattacagggacgcgaccagaaaatcgccaacaagaggtctca
gatatttcaagacagttaaaaatcttagccaaggagctcaaagttcctgtaattgccttg
agtcagttatctcgtggggttgaacaacgtcaggataaacgaccagtcttgtctgatatc
cgtgaatcaggatctatcgagcaggatgccgacattgtagctttcttatatcgtgatgat
tactatcgaaaagagagtgaagaatcagagaatgcgattgaagataatacaatcgaagtt
atcttagaaaaaaaccgtgctggtgcgcgtggaacagttaagttattattccaaaaagaa
tataataaattttcatcgattgctcagtttgaggaatcgtaa
DBGET
integrated database retrieval system
