Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM0109
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Entry
STM0109 CDS
T00065
Symbol
yabN
Name
(RefSeq) putative periplasmic binding protein of transport system
KO
K11925
SgrR family transcriptional regulator
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stm03000
]
STM0109 (yabN)
Transcription factors [BR:
stm03000
]
Prokaryotic type
Helix-turn-helix
Other families
STM0109 (yabN)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Crp_2
HTH_IclR
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
1251627
NCBI-ProteinID:
NP_459114
UniProt:
Q8ZRV0
LinkDB
All DBs
Position
complement(126848..128506)
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AA seq
552 aa
AA seq
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MPSGRLQQQFIRLWQCCDGKTQDTTLNELADLLNCSRRHMRTLLNTMQARGWLTWEAEVG
RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKSAVRQMLISHLGRSFRQGRH
ILRVLYYRPMHNLLPGTALRRSETHIARQIFSSLTRVNEENGELEADIAHHWQQISPLLW
RFYLRPGIHFHHGRELEMEDVISSLTRINTLPLYSHITKIDSPTAWTLDIHLSQPDRWLP
WLLGQVPAMILPRKWETLANFASHPIGTGPYAVRRNTPNQLKILAFDDYFGYRALIDEVN
VWVLPDISEEPACGLMLEGPIQGGEKAIESRLEEGCYYLLFDARTPRGAHPQVREWVSHV
LSPTNLLYHADEPLQQLWFPAYGLLPRWHHARPGPGEKPAGLETLTLTFYREHIEHRVIA
RIMSALLAEHQVHLHIQEIDYDQWHAGEIESDIWLNSANFTLPLDFSLFAHLCEVPLLQN
CIPRDWQGDAAQWRAGEMNLANWCQQLLANKAIVPLIHHWLIIQGQRSMRGLRMNTLGWF
DFKSAWFAPPDP
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaggtcgcctgcaacaacaatttatccgtctctggcaatgttgtgacggtaaa
acgcaagacaccacgcttaatgagctggcggatctgctgaactgttcgcgtcgccatatg
cgtacgctgctaaatacgatgcaggcgcgcggttggctaacatgggaagccgaggttgga
cgcggaaagcgttcgcgtctgacgttcctgtataccggactggcgctgcaacagcagcgg
gcggaagacctgctggaacaagatcgaatcgatcaactggtacaactggtcggcgataaa
agcgctgtcaggcaaatgctgatttcccatctgggacgcagcttccgccaggggcggcat
attctgcgggttctttactatcgtccgatgcacaatcttctgccgggaaccgcattacgt
cgctcggaaactcatattgcccggcaaattttcagttcgctcacgcgggtaaatgaggaa
aacggggaactggaagcggacattgcgcaccactggcagcaaatttcccctttactgtgg
cgcttctacctgcgccccggcattcattttcatcatggccgcgagctggagatggaagat
gtcatctcctcgctgacgcgtatcaatacgcttccgctttactcgcacatcacaaagata
gactcccctaccgcgtggacgctggatattcatctttcccagccggatcgctggttgccg
tggctgctgggccaggtcccggcgatgattttgccgcggaagtgggaaacgctggctaat
ttcgccagccaccctatcggcaccgggccttatgccgtgcggcgtaatacgccaaaccag
ctcaagatactcgcctttgatgattacttcggctatcgggcgttgatagacgaagtgaac
gtctgggtactgccggatatcagtgaagaaccggcctgcggcttgatgctggaagggccg
atacaaggcggtgaaaaagcgatagaaagccgactggaagaggggtgctattacctgcta
ttcgacgccagaacgccgcgcggcgcacatccgcaggtcagagaatgggtaagccacgtc
ctctcccccaccaatttactctatcatgccgatgaaccgctacagcagctctggttcccg
gcctatgggcttttaccgcgctggcatcacgcccgtccaggcccgggcgaaaaacccgcc
gggctggaaaccctcacgctgaccttctatcgcgaacacattgagcaccgggttatcgcc
cgtatcatgagcgcgcttctggctgaacatcaggtgcatctgcatattcaggagatcgac
tacgatcaatggcacgccggcgagatcgaaagcgatatctggctcaatagcgctaacttt
acgctgccgctggatttctcgctgttcgcgcacttgtgcgaagtaccgctcttgcagaac
tgcattccgcgcgactggcagggcgacgccgcgcagtggcgcgctggcgagatgaacctg
gcgaactggtgccagcaactgctggccaacaaagcgattgtgccgttgatccaccactgg
ctgattatccagggacagcgcagtatgcgcgggctgcgcatgaataccctcggctggttt
gattttaaatcggcgtggtttgcgccgccagatccttaa
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