Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM0260
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Entry
STM0260 CDS
T00065
Symbol
dniR
Name
(RefSeq) transcriptional regulator for nitrite reductase (cytochrome c552)
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stm01011
]
STM0260 (dniR)
Enzymes [BR:
stm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
STM0260 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
stm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
STM0260 (dniR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM_OapA
DUF3071
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
1251778
NCBI-ProteinID:
NP_459258
UniProt:
Q7CR60
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All DBs
Position
complement(299924..301291)
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AA seq
455 aa
AA seq
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MKAKAILLASVLLVGCQTSQNTGNVQQHAQSLSAAGQGEAGKFTSQARWMDDGTSIAPDQ
DLWAFIGDELKMGIPENSRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPME
LVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALDMM
QRLNKMFDGDWLLTVAAYNSGEGRVMRAIKANKARGKPTDFWSLSLPRETKLYVPKMLAL
SEILKNSKRYGVRLPTTDESRALARVRLNSPVEMAQVADMAGMSISKLKTFNAGVKGSTL
GVSGPQYVMVPKKHAEQLRESLASGEIDAVQSQLIADNTPLNSRSYKVRSGDTLSGIASR
LGVSTKDLQQWNNLRGSRLKIGQSLTVGAGSSAQRLANNSDSITYRVRKGDSLSSIARRH
GVNIKDVMRWNHDTDNLQPGDQLTLFVKDNSTPDS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattactcgcctctgtcctgcttgtggggtgccagacgtctcag
aacactggcaacgtccaacagcacgcacagagcctttctgcagctggtcaaggggaagca
ggaaagtttacgagtcaggcacgatggatggacgacggaacgtctatcgcgccagatcag
gacttgtgggctttcattggcgacgagctaaagatgggaattccggaaaacagccggatt
cgcgaacagaaacagaagtatttacgcaataagagctatctccacgatgtaactttacgg
gcagagccgtatatgtactggatagcggggcaggttaagaaacgtaacatgcctatggag
ctggtactactacccatagtggagagcgcttttgatcctcacgcaacgtctggcgccaat
gccgcaggcatctggcagatcataccgagcacagggcgcaattatggtttaaagcagacc
cgtaattatgacgcgcgtcgcgatgttgtagcctctacgaccgccgcgttagacatgatg
cagcgtctgaacaaaatgtttgacggcgactggctgttaaccgttgcagcgtataacagc
ggcgaaggccgtgttatgcgggcaattaaagcaaacaaagcgcgtggaaaaccgacggat
ttctggtcgctttctttgcccagagaaacaaaactctacgtacctaagatgctggcattg
agtgaaattctcaaaaacagcaaacgctacggcgtacgtctgccaacaacagatgaaagc
cgagcgctggcacgagttcgtttaaacagtccagttgaaatggcgcaggttgcggatatg
gcgggcatgtctatcagcaagctgaagacgtttaatgccggtgtaaaagggtctacctta
ggcgtaagcggtccgcaatatgttatggtgcccaaaaagcatgccgagcagttgcgtgag
tcgctggcttccggtgagattgacgccgttcagtcccaactgatcgccgacaatacgccg
ttgaatagccgtagctataaggtgcgctctggcgatacgctttccggtattgcttcgcgg
cttggcgtaagcacgaaggacttgcagcagtggaacaacctgcgtggttcacgcctgaaa
atcgggcaaagcctgaccgtgggcgctggcagcagcgcgcaacgactggcaaacaatagc
gatagcattacctatcgtgtccgtaaaggcgattcgctttccagtatcgccagacgtcac
ggggtgaatatcaaagatgtgatgcgctggaaccatgatacggataatctacaaccgggc
gatcagcttacgttgtttgtgaaggacaatagcacgccagactcctga
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