Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM0423
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Entry
STM0423 CDS
T00065
Symbol
ispA
Name
(RefSeq) geranyltranstransferase (farnesyldiphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00900
Terpenoid backbone biosynthesis
stm01100
Metabolic pathways
stm01110
Biosynthesis of secondary metabolites
Module
stm_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
STM0423 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
stm01006
]
STM0423 (ispA)
Enzymes [BR:
stm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
STM0423 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
STM0423 (ispA)
Prenyltransferases [BR:
stm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
STM0423 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-GeneID:
1251942
NCBI-ProteinID:
NP_459418
UniProt:
Q8ZRD0
LinkDB
All DBs
Position
complement(476517..477416)
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AA seq
299 aa
AA seq
DB search
MDFTQQLQACVTQANQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGQMFG
VSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL
AFAIISDAPMPEVADRDRIAMIAELANASGIAGMCGGQALDLAAEGQRITLDALERIHRH
KTGALIRAAVRLGALSAGDKGRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggactttacgcagcagctacaggcttgcgtaacgcaagcgaatcaggcgctgagccgt
tttatcgcgccactgccctttcagaacactcccgtggtcgaagccatgcagtatggcgca
ttattaggcggtaaacgcctgcggccatttctggtttacgccaccggtcaaatgtttggc
gtcagtacggcaacgctggatgcgccagctgcggcggtcgaatgcattcatgcctattcg
ctgatccatgacgacctgccagcaatggacgatgacgatttgcgtcgcggcctgccgact
tgccatattaaatttggcgaagccaacgcaatcctggcgggagacgcgttgcagacgctg
gcgtttgccattatcagcgacgcgccgatgccggaagtcgccgatcgcgatcgtatcgcg
atgatcgccgaactggcaaacgccagcggtatcgccggtatgtgcggcggtcaggcattg
gatctggcggcagaaggccagcggatcactctggacgcgctggaacgcattcatcgccat
aagaccggcgcgctcattcgcgccgccgttagacttggcgcattgagcgcgggcgataaa
ggacggaatactctgccgatacttgaccgctatgcagagagtatcggccttgccttccag
gttcaggatgacattctggatgtggtgggcgatactgcaacgttaggtaaacgtcagggc
gcagaccagcagcttggcaaaagtacctaccctgcacttctgggtcttgagcaagcccgg
aataaagcccgggacctgatagaggacgcccgtcagtcgttacatcagctggccgcgcaa
tcactggacacctcggcactggaagcgctagcgaactacataatccagcgtgataaataa
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