Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM0484
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Entry
STM0484 CDS
T00065
Symbol
dnaX
Name
(RefSeq) DNA polymerase III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm03030
DNA replication
stm03430
Mismatch repair
stm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STM0484 (dnaX)
03430 Mismatch repair
STM0484 (dnaX)
03440 Homologous recombination
STM0484 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stm03032
]
STM0484 (dnaX)
03400 DNA repair and recombination proteins [BR:
stm03400
]
STM0484 (dnaX)
Enzymes [BR:
stm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
STM0484 (dnaX)
DNA replication proteins [BR:
stm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
STM0484 (dnaX)
DNA repair and recombination proteins [BR:
stm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
STM0484 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
ResIII
AAA_2
AAA_14
AAA_30
AAA_7
AAA_assoc_2
PIF1
TsaE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
1252004
NCBI-ProteinID:
NP_459479
UniProt:
P74876
LinkDB
All DBs
Position
540910..542838
Genome browser
AA seq
642 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAVVDANGERVMSLINEAAARGIEWEALLVEMLSLLHRIAMVQLSPA
ALGSDMAAIEQRMRELARTVPPGDLQLYYQTLLIGRKELPWAPDRRMGVEMTLLRALAFH
PRMPLPEPETPRQSFAPVAPTAVMTPPQLQQPSAPAPQTSPAPLPASTSQVLAARNQLQR
AQGVTKTKKSEPAAASRARPVNNSALERLASVSERVQARPAPSALETAPVKKEAYRWKAT
TPVVQTKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVAL
NAWKEQNGNAVCLHLRSTQRHLNSSGAQQKLAQALSDLTGTTVELTIVEDDNPAVRTPLE
WRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagccagaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgcattcatcacgca
tatcttttttccggcacgcgcggcgtcggtaaaacctctatcgcccggctgctggcgaag
gggctgaactgcgaaaccggtattaccgcgacgccgtgcggcgtttgcgataactgtcgg
gaaattgagcaggggcgttttgtcgatctcattgagattgacgccgcatcgcgtaccaaa
gtcgaagacacccgcgacctgctggataacgtccagtacgcgcctgcgcgcggtcgcttt
aaagtctatctgatcgatgaagtccacatgctgtcgcgccacagctttaatgcgctactt
aaaacgcttgaagaaccgccagcgcatgtgaaatttttactggcgaccaccgatccgcag
aagctgccggtgaccattttgtcgcgctgcctacagtttcatctcaaagcgctggatgtt
gaacagattcgccatcagcttgagcatattctcaatgaggaacatatcgctcacgaaccc
cgcgcgttgcagttgttatcgcgtgcggctgacggcagcctgcgcgatgcattaagtctg
actgaccaggcgatcgccagcggcgacgggcaggtttcgacgcaggcggtaagcgccatg
ctcggtacgctggacgacgaccaggctttgtcattagttgaggcggtggttgacgctaac
ggcgaacgcgtcatgtcgcttatcaacgaggcggcggcgcgcggtattgaatgggaagcg
ctgctggtcgaaatgcttagcctgctgcaccgtattgcgatggtgcaactttcgcctgcc
gcgttaggcagcgatatggcggctatcgagcaacggatgcgcgaacttgcccggacggtg
cctcccggcgatcttcagctctattatcagacgttgttgattggtcgcaaagaattgccc
tgggcgccggaccggcggatgggcgttgaaatgacgttactgcgtgcactggcgtttcac
ccgcgtatgcccttgccggagcctgaaacgccgcggcagtcttttgcgcccgtggcccca
acggcggtaatgacgccgccgcagctgcagcagccgtcggcgcccgcgccgcagacatcg
ccagcgccgctgccggcgtctaccagtcaggtgctggcggcgcgcaatcagctacagcgc
gcgcagggagtaaccaaaacaaaaaagagtgaaccggcagccgcatcccgcgcgcggccg
gtgaataactctgcgctggagcggctggcctcggtttcggagcgcgtacaggcgcgcccg
gcgccgtccgcgctggaaacggcgccagtaaagaaagaggcttatcgctggaaggccacc
acgccggtagtacaaaccaaagaagtggtggctacgccaaaagcgcttaagaaagctctg
gagcatgaaaaaacgccggagctggcggctaaactggcggcggaagcgattgagcgcgat
ccgtgggcggcgcaggtaagccagctttctttgcctaagctggtggagcaggtggcgctt
aatgcctggaaggagcagaacggcaacgcggtttgtctgcatctgcgttcgacgcagcgg
cacctcaattccagcggcgcgcagcaaaagctggcgcaagcgctcagcgatctgacggga
acgacggttgaactgaccatcgttgaagatgataatcccgcggtgcgtacgccgctggaa
tggcgtcaggccatttatgaagagaaactcgcgcaagcgcgtgagtcaattattgcggat
aataacattcagacgctgcgtcgattcttcgacgccgagctggatgaagagagtatccgc
cccatttga
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