Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1215
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Entry
STM1215 CDS
T00065
Symbol
ycfS
Name
(RefSeq) putative periplasmic protein
KO
K19236
L,D-transpeptidase YcfS
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
STM1215 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stm01002
]
STM1215 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
stm01011
]
STM1215 (ycfS)
Peptidases and inhibitors [BR:
stm01002
]
Cysteine peptidases
Family C82
STM1215 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
stm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STM1215 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-GeneID:
1252733
NCBI-ProteinID:
NP_460185
UniProt:
Q8ZQ02
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All DBs
Position
complement(1297772..1298737)
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AA seq
321 aa
AA seq
DB search
MFNNTRLSRWWALLALTATIMLALPAQANTWPLPPPGSRLVGENKFHVVEDDGGSLEAIA
KKYNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYQPGK
NTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDGDIETLFRQVTPGTKVNI
INTPIKASVEPGGVRLVEVHQPLSKNIGDDPQVLPIVLNGPMQAFKDAPQTDAAVMEHVM
EVRSGMPVDVTRQAEAKPQSL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaatacgcgactctctcgctggtgggcgttgcttgcgcttaccgcgaccatc
atgcttgcccttcccgcgcaggcgaatacgtggcctcttccgccccccggcagtcgactg
gtgggagaaaataaattccatgtcgttgaagacgacggcggctcgctggaggcgatcgcc
aaaaaatataacgtgggctttttagccctgttacaggccaaccccggcattgatccttat
gtgccacgcgcaggcagcgtgctaacgattccgctgcaaacgctgctaccggacgcgcca
cgtgaaggtatcgtcattaacctcgcggaattacggctttactattatcaaccggggaaa
aatacggtcacggtctaccctatcgggattggccaactgggcggcgataccctgacgcca
acgatggtgacgaccatttcggataaacgcgccaatccaacctggacgccgaccgccaat
attcgcgcccgttataaagcgcaaggtatcgatctccccgccgtggtgcctgccggtccc
gataacccaatgggacatcacgcgattcgtttagcggcctacggcggcgtctatctgtta
catggcacgaatgccgattttggcattggtatgcgcgtcagttccggctgtatccgtctg
cgcgacggtgatatagagacattgttccgtcaggtcacgccgggaaccaaagtgaatatt
atcaatacgccgattaaagcctcggtggagccaggcggcgtgcgactggtggaagttcat
cagccgctgtctaaaaatataggcgacgatccgcaggtgttgccgattgtgctgaatggc
ccgatgcaggcctttaaggacgcgccgcagaccgatgctgcggtgatggaacatgttatg
gaagtgcgttccggaatgccggtggatgtaacccgtcaagcagaggcgaaaccgcagtcg
ctgtaa
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