Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1560
Help
Entry
STM1560 CDS
T00065
Name
(RefSeq) putative alpha amylase
KO
K01236
maltooligosyltrehalose trehalohydrolase [EC:
3.2.1.141
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00500
Starch and sucrose metabolism
stm01100
Metabolic pathways
stm01110
Biosynthesis of secondary metabolites
Module
stm_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
STM1560
Enzymes [BR:
stm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.141 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase
STM1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
CBM_48
Motif
Other DBs
NCBI-GeneID:
1253078
NCBI-ProteinID:
NP_460519
UniProt:
Q8ZPF0
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(1640710..1642494)
Genome browser
AA seq
594 aa
AA seq
DB search
MSSKIFCKSWGAEYIAADVVRFRLWATGQQKVMLRLAGKDQEMQANGDGWFTLDVAGVTP
GTEYNFVLSDGMVVPDPASRAQKTDVNGPSYVVDPGSYTWRNTGWKGSRWEQAVVYEMHT
GTFTPEGTFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDD
FKAFIDAAHGYGLSVVLDIVLNHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRR
YIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLVEIAQRIREDITDRPIHLTTEDSRN
IISLHPRDQDGNAPLFTAEWNDDFHNAVHVFATGETQAYYNDFADAPEKHLARALAEGFA
YQGEISPQTGEPRGVKSTGQPPVAFVDFIQNHDQVGNRAQGDRLITLAGAERTKVLLATL
LLSPHIPLLFMGEEYGESRPFLFFTDFHGDLARAVREGRAKEFADHAGENVPDPNAPETF
QRSKLNWKQQHSEEGKAWLAFTRELLLLRQKHIVPLLSAARESSGTVLQTAPGFIAVSWR
FPGGTLSLALNISATTVLLPDLPGKTLFAWPNESTGSLSQHSLIVRLAQGESAS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaaattttttgcaaaagctggggggctgaatatatcgccgctgatgttgtc
cgctttcgtctttgggccaccggtcagcaaaaggttatgctcaggcttgcgggtaaagat
caggaaatgcaggcgaacggtgacggctggtttacgctggacgtcgccggggtgacgcca
ggtacggagtataactttgtactcagcgatggcatggtggtccccgatccggcttcccgc
gcccaaaaaactgacgtcaacggtccgtcatatgtggttgatccaggcagctacacgtgg
cgcaacaccgggtggaaaggtagccgttgggagcaggccgtggtgtatgagatgcataca
ggcacgttcactccggaaggcaccttccgcgccgcaatagcgaagctgccttatctcgct
gaactcggcgttaccgttattgaagtgatgcccgttgcgcaatttggcggcgagcgtggc
tggggctatgacggcgtactgctttacgcgccgcattctgcctatgggacgccggatgat
ttcaaggcgtttattgacgccgcgcatgggtatggtctttccgtcgtcctggatattgtg
ctgaaccatttcggcccggaaggaaattatttaccgctattggcgccggcgtttttccac
aaagagcgcatgacgccgtggggaaatggtatcgcctatgatgtcgacgccgtgcggcgc
tatatcatcgaggcgccgttatactggctgacagaataccatctcgacggcttacgcttt
gacgctatcgatcagattgaggacagtagcgccaggcatgtgctggttgaaatcgcacaa
cgtattcgggaagacattaccgacaggcccattcatctgaccaccgaagatagccgcaat
attatttctctgcatccccgagatcaggatggcaatgcgccgctgtttaccgccgaatgg
aatgacgattttcataatgccgtccacgtttttgcgaccggagagacccaggcctactac
aacgattttgctgatgccccggaaaaacacctcgcaagagcgctggccgaaggattcgct
tatcagggagaaatttcaccgcaaaccggcgaacctcgcggcgtaaaaagtaccggacaa
cccccggtcgcttttgtggattttattcagaatcacgatcaggtcggtaaccgcgcccag
ggcgacagactgataaccctggcgggtgctgaacgaacaaaagtattgctcgccacgttg
ctgctttcaccgcatattccgctgctttttatgggcgaagagtatggcgaaagccgtcct
tttcttttttttaccgatttccatggggatttagcccgcgccgttcgtgaaggtcgcgca
aaagagtttgccgatcatgcaggggaaaatgttccggacccgaatgcgccagagaccttt
caacgctcaaaacttaactggaagcaacagcacagtgaagagggtaaagcgtggctggcg
tttacccgcgaactactgcttttgcgccagaagcatatcgtgccgctgttgtccgctgcc
cgtgagagctcaggaacggtattgcaaaccgcgcccgggtttattgccgttagctggcgt
tttccgggaggaacgctgtcactggcgctgaatattagcgccacgacggtattgctgccc
gatttaccgggtaagactctcttcgcctggccgaatgaatccaccgggtcgctttcccaa
cattctcttattgtccgcttagcccagggagagtctgcatcatga
DBGET
integrated database retrieval system
