Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1587
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Entry
STM1587 CDS
T00065
Symbol
yncD
Name
(RefSeq) putative outer membrane receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stm02000
]
STM1587 (yncD)
Transporters [BR:
stm02000
]
Other transporters
Pores ion channels [TC:
1
]
STM1587 (yncD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-GeneID:
1253105
NCBI-ProteinID:
NP_460546
UniProt:
Q8ZPD5
LinkDB
All DBs
Position
1673904..1676024
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AA seq
706 aa
AA seq
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MKIISVRQRLYPALLLPLTFSPVLQAASAPNEQTMIVTATPQTVSELDTPAAVSVIEGED
MRLATPRVNLSESLTSVPGLQVQNRQNYAQDLQISIRGFGSRSAFGVRGIRLYVDGIPAT
MPDGQGQISNIDINSIQDVEVLRGPFSALYGNASGGVINVTTETGRQPPTLEASSYYGSY
GSWRYGLKATGAMGDGTQPGDVYYTVSTTRFTTHGYRDHSGARKNLANAKLGVRLDDVSK
LSLIFNSVDIKADDPGGLTESEWKADPQQAPRAEQYNTRKTIKQTQAGLRYERQLSAQDD
ISVMAYAGERETTQYQSIPLVAQLKPAQAGGVITLQRHYQGIDSRWTHRGELGVPVTFTG
GVNYENMSENRKGYNNFRLNNGTPEFGHKGDLRRDERNLMWNVDPYLQTQWQLTQKLSLD
AGVRYSSVWFDSNDHYIAPGNGDDSGDASYHHWLPAGSLKYALTDAWNLYLAAGRGFETP
TINELSYRADGQSGFNFDLKPSTNDTVEVGSKTRIGNGLLTAALFQTDTDDEIVVASSMG
GRTTYKNAGKTRRQGAELALDQRFAGDWRVKASWTWLDATYRSNVCQGQNCDGNRMPGIA
RNMGFASLGFIPDEGWYAGTDVRYMGDIMANDENTAKAPSYTVVGLNTGYKFNYSQLTVD
IFGRVDNLFDKEYIGSVIVNESNGRYYEPAPGRNYGVGINLAWQFE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatttccgttagacagcgactttatcccgccctcttattgcctctgaccttc
tccccggtccttcaggccgccagcgcgcccaatgaacaaaccatgatagtcaccgcaacg
ccgcaaaccgtatccgagctggatacacctgccgccgttagcgtcattgagggagaagac
atgcgtctggcgacgcctcgcgttaatttatctgagtctttaaccagcgtcccgggattg
caggtgcagaaccggcagaactacgcgcaggatctgcaaatctctatccgtggatttggc
tcgcgttccgcctttggcgtgcgcggcattcgtctgtatgttgatggcattcccgccacc
atgccggatggacaaggccagatttcgaatattgatattaacagcatacaagacgttgaa
gtgttacgcggccccttctcagcgctatacggcaatgcttccggcggcgtaataaatgtc
accaccgaaaccgggagacaaccgcccacccttgaggccagcagctactacggcagttat
ggaagctggcgctatggactaaaagccacgggcgcgatgggtgacggcacacagccaggc
gacgtgtattacacggtatcgactacccgtttcaccacccacggctaccgcgatcacagc
ggcgcgcgaaaaaatctggctaatgccaaactgggcgtgcgccttgacgatgtcagtaaa
ctctcgctgatttttaatagtgtggacattaaggcggacgatcccggcggacttaccgaa
tctgaatggaaagccgatccgcaacaggcgccgcgcgctgaacagtacaatacgcgtaaa
accatcaaacaaactcaggcaggattgcgttatgaacgtcagctcagcgcgcaggatgat
atcagcgtgatggcctacgccggagagcgggaaaccacgcaataccagtctattcccctg
gtggcacagctaaaaccagcccaggctggcggcgtaattacactgcaacgccactatcag
ggcattgattcccgctggactcaccggggagaattaggtgtgccggtcaccttcactggc
ggagtaaattatgaaaatatgagcgaaaaccgcaagggttacaataatttccgtctcaac
aacggcacccctgagttcgggcataaaggcgatttacggcgggatgagcgtaacctgatg
tggaatgtcgatccttatctgcaaacccagtggcagcttacgcaaaaactctcgctggat
gctggcgtgcgctacagttccgtgtggttcgattctaacgatcactatatcgcgcccggc
aatggcgatgacagcggcgacgccagctatcaccactggctacccgccggatcgctaaaa
tatgcgttaactgacgcctggaatctctatcttgctgccggtcgcggatttgaaactccc
actatcaatgagctttcttatcgcgctgacggccaaagcgggttcaactttgacctcaaa
ccgtcgaccaatgatacggtggaagtcggcagtaaaacgcggattggcaacggcttgttg
accgccgcgttatttcaaaccgataccgatgatgaaattgtcgtcgccagcagtatggga
ggacgcactacctacaaaaacgcgggcaaaacgcgccgccagggcgcagaacttgcgttg
gaccagcgcttcgccggcgactggcgggtgaaagcatcatggacctggctggatgcgacc
tatcgcagtaacgtttgtcaggggcaaaactgtgatggaaaccggatgcccggcatcgcc
cgtaatatgggattcgcctcattaggttttatcccggatgaggggtggtacgccggaaca
gacgttcggtatatgggcgatatcatggccaatgatgaaaataccgccaaagcgccttcg
tataccgttgttggactaaatacagggtataaatttaattacagtcagcttaccgtcgat
atttttgggcgggtagataatctatttgataaagaatatataggttcggtgatcgttaat
gaatctaatggccgatattatgagccagcgccagggcgtaactatggcgtggggattaat
ctggcatggcaatttgaataa
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