Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1655
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Entry
STM1655 CDS
T00065
Symbol
dbpA
Name
(RefSeq) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stm03009
]
STM1655 (dbpA)
Enzymes [BR:
stm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
STM1655 (dbpA)
Ribosome biogenesis [BR:
stm03009
]
Prokaryotic type
rRNA helicases
STM1655 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
CMS1
Med20
Motif
Other DBs
NCBI-GeneID:
1253173
NCBI-ProteinID:
NP_460614
UniProt:
Q8ZP87
LinkDB
All DBs
Position
complement(1748282..1749655)
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AA seq
457 aa
AA seq
DB search
MTTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTGSGKTAAFGLG
LLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKETVSLDALHILVMDEADRMLDMGFSDAIDEVIRFAPATRQT
LLFSATWPEAIAAISGRVQQQPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQ
PASCVVFCNTKKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEAQRANILSEML
QLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDILGALTGDIGLDGADIGKINV
HPMHVYVAVRQAVAQKAWKQLQNGKIKGKSCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccactttttcaaccctgaatgttttgcccgccgcccagctcaataaccttactgag
ctgggctatcttgagatgacgcctgttcaggccgcagcattacccgtcattctggcgggt
aatgatgtgcgtgtgcaggccaggaccggtagcggcaaaacggcggcgtttggtcttggg
ctcttgcatcgaattgacgtcactctgttccagacacaggcattagtgctgtgcccgacg
cgggagctggcggatcaggttgccggagagttacgtcgcctggcccgttttctgccaaat
accaaaattctgaccttgtgtggcgggcaaccctttggcgcacagcgcgactcgcttcag
cacgctccgcatatcattgtcgcgacgccggggcgcctgctggatcatttacaaaaagaa
accgtatcgctggatgcgctgcatattctggtaatggatgaagcagaccgaatgctggac
atgggattcagtgacgccattgatgaggtgatccgctttgcgcctgcgacgcgccagacg
ttattgttttcagcaacctggcctgaggccatcgcggcgattagcggtcgtgtacagcag
cagccaatacgtattgaaatcgatacggtagatgcgctaccggctatcgaacaacagttc
ttcgaaacgtctgcgcatgaaaaaatttcgctgctacaaacgttgcttagccagcatcag
ccagcgtcctgcgtggtattttgcaataccaaaaaagattgtcaggccgtttgtgatgcg
cttaatgcggtaggacaaagcgcgttggcgctccacggcgatctggaacaacgcgaccgc
gaccagacgttggtgcgttttgcaaatggcagcgcgcgcattctggttgccaccgacgtt
gccgcgcgagggttagacattaaatcgctcgaactggtggttaactatgaactggcctgg
gacccggaggtgcatgtccatcgtattggccgtacggcgcgcgcgggaagcagcggcctg
gcgatcagtttctgcgcgccggaagaggcgcagcgggcgaatattctttcagaaatgctg
caactcaagctgaactggctgaatgcgcccgcccggcagccgttactccctctggccgca
gagatggctaccctatgcattgacggcggcaaaaaagcgaaaatgcgtccgggagatatt
ttgggcgcgctgaccggcgatattggattagacggggcggatattggcaaaattaacgtg
catccaatgcacgtttacgtcgccgtacgtcaagcagtagcgcaaaaagcctggaagcag
ttgcaaaacgggaagatcaaaggcaagtcatgccgggtacggctattaaaatga
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