KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1746
Entry
STM1746           CDS       T00065                                 
Symbol
oppA
Name
(RefSeq) oligopeptide transport protein with chaperone properties
  KO
K15580  oligopeptide transport system substrate-binding protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01501  beta-Lactam resistance
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM1746 (oppA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM1746 (oppA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    STM1746 (oppA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM1746 (oppA)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    STM1746 (oppA)
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-GeneID: 1253265
NCBI-ProteinID: NP_460705
UniProt: P06202
Structure
LinkDB
Position
complement(1839602..1841350)
AA seq 582 aa
MIAKAVTDLAVHHQCCTGTLTGLNRLVKTSNYNEWSTNTMSNITKKSLIAAGILTALIAA
SAATAADVPAGVQLADKQTLVRNNGSEVQSLDPHKIEGVPESNVSRDLFEGLLISDVEGH
PSPGVAEKWENKDFKVWTFHLRENAKWSDGTPVTAHDFVYSWQRLADPNTASPYASYLQY
GHIANIDDIIAGKKPATDLGVKALDDHTFEVTLSEPVPYFYKLLVHPSVSPVPKSAVEKF
GDKWTQPANIVTNGAYKLKNWVVNERIVLERNPQYWDNAKTVINQVTYLPISSEVTDVNR
YRSGEIDMTYNNMPIELFQKLKKEIPNEVRVDPYLCTYYYEINNQKAPFNDVRVRTALKL
ALDRDIIVNKVKNQGDLPAYSYTPPYTDGAKLVEPEWFKWSQQKRNEEAKKLLAEAGFTA
DKPLTFDLLYNTSDLHKKLAIAVASIWKKNLGVNVNLENQEWKTFLDTRHQGTFDVARAG
WCADYNEPTSFLNTMLSDSSNNTAHYKSPAFDKLIADTLKVADDTQRSELYAKAEQQLDK
DSAIVPVYYYVNARLVKPWVGGYTGKDPLDNIYVKNLYIIKH
NT seq 1749 nt   +upstreamnt  +downstreamnt
gtgatagcaaaagcagtgacagacctggcagtacaccaccagtgctgcacaggaaccctg
acgggattaaacaggctggtaaaaaccagtaattataatgagtggagtacaaacacaatg
tctaacatcacgaaaaaaagtttgattgcagcgggaatactcactgcgctcatcgccgcc
agcgccgcgactgcggcagacgtgcccgccggcgttcagttagccgacaagcaaacgttg
gtacgtaataacggatcagaagtgcagtctctcgacccgcataaaattgaaggcgtgccg
gaatcgaacgtcagccgtgacctcttcgaaggcttattaattagtgatgtcgaggggcat
ccttcaccgggcgtcgcggaaaaatgggaaaataaagattttaaagtctggacattccat
ctacgtgaaaatgcgaaatggtcagatggtacgcccgtcaccgcccatgatttcgtttat
agctggcaacgcctggccgatcctaatacggcatcgccgtacgccagctatctgcaatac
ggtcatatcgctaatatcgatgacattatcgccggtaaaaaacccgccaccgatctgggg
gtaaaagcgcttgatgatcacacctttgaagtgaccttaagtgagccggtgccttatttc
tacaaattgttggtccacccttcagtgtctcctgtaccgaaatcagcggtcgaaaaattt
ggcgataaatggacgcaaccggccaatattgtcactaacggcgcttataagttaaaaaac
tgggtggtgaacgaacgtatcgtgctggagcgtaacccgcaatactgggataacgccaaa
accgtcatcaatcaggtaacttatttgcctatctcttcggaggtgacggatgtcaaccgc
taccgcagcggcgagatcgatatgacttataacaatatgccgatcgaattattccagaaa
ctgaagaaagagatcccgaatgaagtccgcgtagacccttatttgtgtacctattattac
gaaattaataatcaaaaagcgccgtttaacgatgtccgcgtgcgtaccgcgctgaaactg
gcgttagatcgcgacattattgttaataaggttaaaaatcagggcgatttacccgcttat
agctacacgccgccgtataccgatggcgcaaaactggtagagcctgagtggttcaaatgg
tcccagcaaaagcgtaatgaagaagcgaagaaattgttggctgaagccggctttacggcg
gataagcccttaacattcgacctgctgtataacacctccgatctgcataaaaaactggcc
attgccgtggcgtctatctggaagaaaaatctgggcgtcaatgtgaatctggagaatcag
gaatggaaaaccttcctggatacccgtcatcagggcacctttgatgttgccagagccggg
tggtgcgcagattataatgaaccgacctcgttcctgaataccatgttgtccgacagttca
aataacaccgcgcattataagagcccggcgtttgataagctgattgccgacacgctgaaa
gtggcggacgatacgcagcgcagcgaactctacgctaaagcggagcagcagttagataaa
gactcggctattgtgccggtgtattactacgttaacgcgcgcctggtgaaaccctgggtg
ggcgggtataccggtaaagacccgctggataatatttatgtgaaaaacttatatattatc
aaacattaa

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1745
Entry
STM1745           CDS       T00065                                 
Symbol
oppB
Name
(RefSeq) oligopeptide transport protein
  KO
K15581  oligopeptide transport system permease protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01501  beta-Lactam resistance
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM1745 (oppB)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM1745 (oppB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    STM1745 (oppB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM1745 (oppB)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    STM1745 (oppB)
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N
Other DBs
NCBI-GeneID: 1253264
NCBI-ProteinID: NP_460704
UniProt: P08005
LinkDB
Position
complement(1838560..1839480)
AA seq 306 aa
MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERALPPEVLANIEAKYHLNDPIM
TQYFSYLKQLAHGDFGPSFKYKDYTVNDLVAASFPVSAKLGAAAFLLAVIIGVSAGVIAA
LKQNTRWDYTVMGFAMTGVVIPSFVVAPLLVMVFAITLQWLPGGGWNGGALKFMILPMVA
LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIIFRHALKPALLPVLSYMGPAF
VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI
DPKIRY
NT seq 921 nt   +upstreamnt  +downstreamnt
atgttgaaatttattttacgccgctgtctggaagcgattccgacgctgtttattcttatt
accatctctttctttatgatgcgcctcgcgccggggagtccttttaccggcgagcgcgca
ttgccgccggaagtgctggccaatattgaagcaaaatatcatctgaacgatcccatcatg
acgcagtacttcagctacctgaagcagctggcgcatggcgattttggaccatcgtttaaa
tataaagattacacggtcaacgatctggttgccgccagcttccccgtttcggcgaaactt
ggcgccgccgcttttttgctggcggtcattattggtgtcagcgctggcgtgattgccgcg
ctaaagcaaaatacgcgatgggattatacggtgatgggatttgccatgaccggcgtcgtt
atccccagttttgtggtggcgccgctactggtgatggtctttgcgataaccttgcaatgg
ctgcctggcggcggctggaacggcggggcgttaaaatttatgatcctgccgatggttgcg
ctttcactggcctatattgccagcatcgctcgtattacgcgcggctcaatgattgaagtt
ctgcattcgaactttattcgtaccgcgcgggcaaaaggattaccgatgcgcagaattatc
ttccgccatgcgttaaaacctgcgctgctgccggttttatcctatatggggccagccttt
gtcggcattattaccggctcaatggtgattgaaactatttatggcttaccgggcattggg
cagcttttcgttaatggcgcgctcaaccgcgattactcgctggtgttaagtttgaccatt
ctagtcggggcgctgaccatattatttaacgccattgtcgatgtgctctatgccgttatc
gacccgaaaattcgctattga

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1744
Entry
STM1744           CDS       T00065                                 
Symbol
oppC
Name
(RefSeq) oligopeptide transport protein
  KO
K15582  oligopeptide transport system permease protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01501  beta-Lactam resistance
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM1744 (oppC)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM1744 (oppC)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    STM1744 (oppC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM1744 (oppC)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    STM1744 (oppC)
SSDB
Motif
Pfam: BPD_transp_1 OppC_N DUF3040
Other DBs
NCBI-GeneID: 1253263
NCBI-ProteinID: NP_460703
UniProt: P08006
LinkDB
Position
complement(1837637..1838545)
AA seq 302 aa
MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFMHNRAAVASLIVLFLIALFVTVAPMLS
QFTYFDTDWGMMSSAPDMASGHYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVIVGT
LYGSLSGYLGGKIDSVMMRLLEILNSFPFMFFVILLVTFFGQNILLIFVAIGMVSWLDMA
RIVRGQTLSLKRKEFIEAAQVGGVSTASIVIRHIVPNVLGVVVVYASLLVPSMILFESFL
SFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK
DR
NT seq 909 nt   +upstreamnt  +downstreamnt
atgatgttaagtaagaaaaacagcgagacgctggaaaatttcagtgaaaagctggaggtg
gaaggtcgcagcctttggcaagatgcccgtcggcgctttatgcataaccgtgcggcggtg
gccagtcttattgtcctgtttctgatagccctgttcgtgacagtggcgcctatgctgtcg
caatttacctatttcgataccgactggggcatgatgtccagtgcgccggatatggcgtcc
ggtcactatttcggcactgactcttccgggcgcgatctgttggtgcgcgttgccatcggc
gggcgtatctcattaatggtcgggattgccgccgcgctggtggcggtcattgtcggaacg
ctgtatggctcgctgtccggctatctgggcggcaaaattgattctgtgatgatgcgtttg
ttggagatcctcaactcgttcccgtttatgttctttgtgattttgctggtgacgtttttt
gggcagaacattctgttgattttcgtcgccatcggcatggtctcctggcttgatatggcg
cgtatcgtgcgtggccaaaccctaagtcttaaacgtaaagaattcatcgaagccgcgcag
gtgggtggtgtgtcgactgccagcattgtgatccgccatattgtgcctaacgtcctgggc
gtagtggtagtgtatgcatcgttgctggtgcccagcatgattctgtttgagtctttcctc
agtttcctggggcttgggacgcaggaaccgttaagcagttggggagcgttattgagcgat
ggcgcaaattcaatggaagtctcaccgtggctgctgctgtttccggctggctttctcgtg
gtgacgttattctgttttaactttattggcgatggcctgcgtgatgccctcgacccgaaa
gatcgttaa

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1743
Entry
STM1743           CDS       T00065                                 
Symbol
oppD
Name
(RefSeq) oligopeptide transport protein
  KO
K15583  oligopeptide transport system ATP-binding protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01501  beta-Lactam resistance
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM1743 (oppD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM1743 (oppD)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    STM1743 (oppD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM1743 (oppD)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    STM1743 (oppD)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N ATP-synt_ab ABC_ATPase AAA_29 DUF87
Other DBs
NCBI-GeneID: 1253262
NCBI-ProteinID: NP_460702
UniProt: P04285
LinkDB
Position
complement(1836618..1837625)
AA seq 335 aa
MSLSETATQAPQPANVLLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGK
SQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMR
VGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMA
LLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVM
YAGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQ
PRCPHAMEICNNAPPLEAFSPGRLRACFKPVEELL
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagcttatcagaaaccgcaactcaggcgccgcaaccggcgaatgtactgctggaggta
aacgatcttcgtgttacgttcgctacgcctgatggcgatgtgacggcggtcaacgatctg
aactttacgcttcgcgctggagaaacgttaggtattgttggcgagtctggatcggggaaa
tcgcaaacggcgttcgcattaatgggactgctggcgacgaatggtcgaatcggcggttcc
gcgaccttcaacggacgtgaaattcttaatctacctgagcgcgaactgaatacgctgcgc
gcagaacagatttcgatgatttttcaggacccgatgacctcgctaaatccttatatgcgc
gttggggagcagttaatggaagtcctgatgctgcataaagggatgagcaaagcggaagct
tttgaagagtccgtcagaatgctggatgccgtaaaaatgccggaagcgcgcaaacggatg
aaaatgtacccgcacgaattttccggcggaatgcgtcaacgtgtgatgattgcgatggcg
ctgttgtgcaggccgaaactgcttattgccgatgagcctaccaccgcgcttgatgttacc
gtgcaggcgcagattatgaccttgcttaatgagctaaagcgcgaatttaataccgccatt
atcatgattacccacgatctgggcgtggtcgcgggtatttgcgataaggtcctggtaatg
tatgccgggcgtaccatggaatacggtaaggcgcgcgatgtcttttatcagcccgttcat
ccgtattcgataggcctgcttaatgcggtgccgcgtctggatagcgagggggcggaaatg
ctgacgattccgggcaatcctcccaatttattgcgtttgcctaaaggttgtccgttccag
ccgcgttgtcctcatgcgatggagatctgcaataatgcgccgccacttgaagcgtttagt
cctggtcgcttgcgcgcctgttttaaaccggtggaggaactgctatga

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1742
Entry
STM1742           CDS       T00065                                 
Symbol
oppF
Name
(RefSeq) oligopeptide transport protein
  KO
K10823  oligopeptide transport system ATP-binding protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm01501  beta-Lactam resistance
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM1742 (oppF)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM1742 (oppF)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    STM1742 (oppF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM1742 (oppF)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    STM1742 (oppF)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_22 SMC_N nSTAND1 MobB PRK NACHT AAA_29 RsgA_GTPase ATP-synt_ab GlgX_C AAA NB-ARC Sigma54_activat RNA_helicase AAA_13 DUF87 DUF5906
Other DBs
NCBI-GeneID: 1253261
NCBI-ProteinID: NP_460701
UniProt: P08007
LinkDB
Position
complement(1835617..1836621)
AA seq 334 aa
MNAVIEQRKVLLEIADLKVHFDIKEGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESG
CGKSTFARAIIGLVKATDGKVAWLGKDLLGMKADEWREVRSDIQMIFQDPLASLNPRMTI
GEIIAEPLRTYHPKLSRQDVRDRVKAMMLKVGLLPNLINRYPHEFSGGQCQRIGIARALI
LEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL
GHAVELGTYDEVYHNPLHPYTKALMSAVPIPDPDLERNKKIQLLEGELPSPINPPSGCVF
RTRCPIAGPECAQTRPVLEGSFRHAVSCLKVDPL
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaatgctgtgattgaacaacgtaaagttctcctcgaaatcgccgatctgaaagtacat
tttgatatcaaagaagggaagcagtggttctggcaaccgccgaaaaccctgaaagcggtg
gacggcgttacgctacgcctgtatgaaggcgaaacgctgggcgtggtgggcgaatccggc
tgcggcaagtcgacgtttgcgcgcgcgattattggtctggtgaaggcgacagatggtaaa
gtcgcctggctgggaaaagatctgctgggcatgaaagcggatgagtggcgcgaggtgcgc
agcgatatccagatgattttccaggacccgctggcgtcactcaacccgcgaatgacgatt
ggcgaaattatcgctgaaccgctgcgcacttatcatcctaaactttcgcgccaggacgtg
cgtgaccgcgtgaaagccatgatgctgaaagtggggctgttgccgaacctcatcaaccgt
tatccccatgaattttccggggggcagtgccagcgcatcggtatcgcccgggcattgatc
ctggaacctaagctcattatttgcgatgagccggtgtcggcgctggacgtttctattcag
gcgcaggtggtgaatttgctccagcagttacagcgagagatggggctgtcgttgattttt
attgcgcacgatctggcggtcgtaaagcacatatccgatcgtgtcctggtgatgtatctc
ggtcatgcagtagaattgggcacctatgatgaggtgtaccataatccactgcatccttat
accaaagcgctgatgtcggcggtaccgattcccgatcccgatctggagcgaaataagaag
atacaattgctggagggcgaattaccttcgcccattaacccgccttccggctgcgtgttc
cgtacacgctgtccgatagccgggccagaatgcgcgcaaacgcgaccggtgctggaaggg
agttttcgccatgccgtttcctgccttaaagtagacccgttataa

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