Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM1898
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Entry
STM1898 CDS
T00065
Symbol
ruvC
Name
(RefSeq) Holliday junction nuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STM1898 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stm03400
]
STM1898 (ruvC)
Enzymes [BR:
stm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
STM1898 (ruvC)
DNA repair and recombination proteins [BR:
stm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STM1898 (ruvC)
RecFOR pathway proteins
STM1898 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-GeneID:
1253419
NCBI-ProteinID:
NP_460855
UniProt:
P66762
LinkDB
All DBs
Position
complement(1993225..1993746)
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AA seq
173 aa
AA seq
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MSIILGIDPGSRITGYGVIRQVGRQLTYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ
PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKS
QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgattattctcggtattgaccccggctcgcgcattaccggttatggcgttatccgc
caggtaggcagacaactgacctatctgggcagcggatgtattcgcaccaaagtcgatgat
ttgccgtctcgtttgaagctcatatacgcaggcgtgacggaaatcatcacgcagttccag
ccggactattttgctatcgaacaagtgtttatggcgaagaacgccgattcagccctcaag
ctgggacaggcgcgcggcgtcgcgattgtcgccgcggtcaatcaggaactgcccgtgttt
gaatacgcggcgcgtcaggtgaagcaaaccgtcgtcggtattggtagcgcggaaaaaagc
caggtacagcatatggttcgtacgttgctaaagctccccgctaacccgcaggccgatgcc
gcggatgcgctggctatcgccattacgcattgccatgttagccagaacgcgatgcaaatg
agcgagagccgactcaatctggcgcggggaaggttgcgctaa
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