Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2094
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Entry
STM2094 CDS
T00065
Symbol
rfbC
Name
(RefSeq) dTDP-4,deoxyrhamnose 3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00521
Streptomycin biosynthesis
stm00523
Polyketide sugar unit biosynthesis
stm00541
Biosynthesis of various nucleotide sugars
stm01100
Metabolic pathways
stm01110
Biosynthesis of secondary metabolites
stm01250
Biosynthesis of nucleotide sugars
Module
stm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STM2094 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STM2094 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STM2094 (rfbC)
Enzymes [BR:
stm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STM2094 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-GeneID:
1253615
NCBI-ProteinID:
NP_461039
UniProt:
P26394
Structure
PDB
PDBj
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All DBs
Position
complement(2175115..2175666)
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AA seq
183 aa
AA seq
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MMIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLR
GLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAH
GFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQLPELSAKDAAAPLLDQAL
LTE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgatgattgtgattaaaacagcaataccagatgtcttgatcttagagcctaaagttttt
ggcgatgagaggggattcttttttgaaagttataaccagcagacctttgaagagttgatt
ggacgtaaagttacatttgttcaagataatcattcaaaatccaaaaagaacgtactcaga
gggctacattttcagagaggagaaaatgcacaggggaagttagttcgttgtgctgtcggt
gaggtttttgatgttgcggtcgatatccgaaaagaatcgcctacttttggtcaatgggtt
ggtgtaaatctgtctgctgagaataagcgacagctttggattccagaaggttttgctcat
ggttttgttactcttagtgagtatgcagagtttctgtacaaagcaactaattattactca
ccttcatcggaaggtagcattctatggaatgatgaggcaataggtattgaatggcctttt
tctcagctgcctgagctttcagcaaaagatgctgcagcacctttactggatcaagccttg
ttaacagagtaa
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