Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2512
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Entry
STM2512 CDS
T00065
Symbol
xseA
Name
(RefSeq) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
STM2512 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stm03400
]
STM2512 (xseA)
Enzymes [BR:
stm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
STM2512 (xseA)
DNA repair and recombination proteins [BR:
stm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
STM2512 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
1254034
NCBI-ProteinID:
NP_461447
UniProt:
Q8ZN58
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All DBs
Position
2626078..2627427
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AA seq
449 aa
AA seq
DB search
MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAK
LQAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDD
APGQIVRAIELANARGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIF
HRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQCVSQRLSQQNPQPRIHRA
QSRIQQLEYRLTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKI
KQVKAGDIMTTRLEDGWLESEVKSVTPGT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttatcctctcaaacttcctcaatttttaccgtaagccgccttaaccagacggttcgt
ctgctgttagaacaggagatgggacaggtatggatcagcggcgagatttctaatttcacg
cagcctgcgtcgggccactggtactttacgctcaaagacgataccgctcaggtgcgctgt
gcgatgttccgtaacagcaatcgccgggtgacgttccgcccgcagcacgggcagcaggtg
ctggtacgcgccaacattacgctgtacgagccgcgcggcgattatcaaatcatcgccgaa
agtatgcagcccgcgggcgaaggcttgttgcagcagaaatatgagcagctaaaagccaaa
ctgcaggccgaaggcttgttcgatcagcagcataaacagccgttgccctccccggcccac
tgcgttggggtgatcacttcgaaaaccggcgcggcgctgcacgatattctccacgtgcta
aagcgtcgtgacccatccctgcccgttattatctatccaaccgcagtccagggcgacgac
gcgccggggcagatcgttcgtgctatcgaactggcgaacgcgcgcggcgaatgtgatgta
ctgatcgtcgggcgcggcggcggttcgctggaagatttgtggagttttaacgacgaacgc
gtggcgcgggcgatttttgccagccgcattccggtggtcagcgccgtcggtcacgaaacg
gacgtcacgatagctgattttgtcgccgacctgcgcgcgcctacgccatcagcagcggca
gaaattgtcagccgtaaccagcaggagttgttgcgtcagatccagtccgcccagcagcgt
ctgggcatggcgatggactactacctcgccaatcgcagccgccgtttcacgcagattttt
caccgtctgcaacagcaacatccgcaactgcgtctggcccgtcagcaaaccgcgctggaa
cgtctacgccaacggatgggatttgcgcttgaggccaggattaagcaggccaatcaacgc
caacagtgcgtaagtcaacgcctgagccagcaaaatccgcagccgcgcattcaccgcgcg
cagtcgcgcatccaacagcttgaatatcgtctgacggagaatatccgctcacggttaagc
gaacagcgcgagcgttttggcaacgcggtcacgcatctggaagcggtcagcccgttagcc
acgctggcgcgcggctatacggtttcgacgacaacggacggcaaggtgctgaaaaagatc
aaacaggtcaaagcaggcgatatcatgaccacgagactggaggacggctggcttgaaagt
gaagtcaaatccgtcacgccgggcacgtaa
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