Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2513
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Entry
STM2513 CDS
T00065
Symbol
shdA
Name
(RefSeq) C-terminal region of AIDA-like protein
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
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Ortholog
Paralog
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
ESPR
Motif
Other DBs
NCBI-GeneID:
1254035
NCBI-ProteinID:
NP_461448
UniProt:
Q8ZN57
LinkDB
All DBs
Position
complement(2627589..2633708)
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AA seq
2039 aa
AA seq
DB search
MRNMYVVASELARGHSKVKAQVCASETHSPNQKSEYGQIIKATRAALACAVAAALGFFSP
LAMADNQVSYADAQPHVLDASTPPISYSGTDEGAALYVSGVATVGWQPTTVTGTGLVIET
SGGGADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSTLRLTDSTLTI
DGNFGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNT
ATDEGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDIT
GGNITSAGTGVYILASDARIDGATINADGDGIFITSKRKLDGYEDLNALTVSDANVTSKT
VALNIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLS
QGSTLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTL
TLQDGSQINATLDTANSAPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTA
ITTDFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSARAAHGTFTVD
AGSTFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAAL
GTGDVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTAD
HADSLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNTYSGGTTITGGTL
TADHADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIG
GTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGGTT
IIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSG
GTTIIGGTLTADHADSLGTGAVANSGVLQVGEGELENTLSGSGSLVKTGTGELTLGGDNS
YSGATTITDGTLIAANVNALGSGNIDNSGTLILDANGAFELANVTTHSGATTALAAGSTL
DAGQFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIG
SDSAITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTDAHG
TFTLSDPDGSFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEG
TLVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQ
QDGSTLNVELNSDSVQPLITGSSATLGGDLVVSDASLQARASDAEFQSFKLMDMTSDISG
DFTSLTMNLTDKPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSF
EVTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGSIGEMGS
QQAVNVASGATFGGSNGTTVNGKVTNEGTLVFGNSEETGAIFTLNGDLINMGTMTSGSSS
STPGNTLYVDGNYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTT
NGIEVVDVGGVSTSDAFELKNEVNAGLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTP
SDGGDDGGNVTPPDDGGDGGNVTPPDDGGDGGDVTPPDHGGDVAPQYRADIGAYMGNQWM
ARNLQMQTLYDREGSQYRNADGSVWARFKAGKAESEAVSGNIDMDSNYSQFQLGGDILAW
GNGQQSVTVGVMASYINADTDSTGNRGADGSQFTSSGNVDGYNLGVYATWFADAQTHSGA
YVDSWYQYGFYNNSVESGDAGSESYDSTANAVSLETGYRYDIALSNGNTVSLTPQAQVVW
QNYSADSVKDNYGTRIDGQDGDSWTTRLGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVS
VSFDDATVKQDLPANRAELKVGLQADIDKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaaatatgtatgtcgtggcttcagaactggcgcgaggccacagcaaagttaaagcg
caagtatgcgcgagtgaaacccattctccaaaccaaaagtccgaatatggacaaataata
aaagcaacgcgcgcggcgctggcttgcgccgtggctgcggcgctcggatttttcagcccg
ctggctatggccgataatcaggtatcatatgctgatgcgcagccccacgttctggatgcg
tcaacgccgccgataagctattcgggcaccgatgaaggcgcggcgctatatgtctcgggt
gtcgccaccgtcggctggcagcccaccacggtcacagggacggggctcgtcattgaaaca
agcggaggcggggctgatgatccggatggcggtaagtatgtttccaacgccatttcgctg
gatcattacgctatccttgagcttaccgacgcgaagataaccactacgggtatttatacc
cagggtatttccgcagcggatggcagcacactgaggttaacagacagtacgctaacgatt
gacggcaatttcggcgtaatgacgttgtatacgggttcagaagcaacgctggacggtacc
atcgttgaggcagctaacagcagcagcgcgcaggtgcaacaaggcagtacgctgaacgtg
ctggacggtagcacaatcaccctggcgcaaggccagataaacgttgttgccggaaacacc
gcgacagacgagggttccaccctgaacctgtctgatagctcggtcagctctgcaggtacg
atgagcaccatccagggtaccaataaggccgctcttaatctcaccaacgcgaccataaca
cataccaatgccagcggcgcggcggtacaggccaataacgccactaccctggatattaca
ggcggcaacattacctctgccggtacgggcgtgtatattctggcgtcggacgccaggatc
gacggcgccaccatcaacgccgacggcgacggtatctttataaccagcaaaagaaaactc
gacgggtatgaggatctcaacgcgctgacggtcagcgacgcaaacgtcacctcaaaaact
gtcgcactgaacattgatggcagcacgaccattaacgaccccattgagctcaccaacagc
acctttacggcgccgaccgcgatcaaattaggcagcaaagcgactattcaggccgaaaaa
acgatgctgaccggcaacattgtccagactgacgcgtcatcgtcatcgctctctttaagc
caggggtccacgttaaccggtagtgtagatgcgatgtttactacgctgtcgctcgacgac
accagccagtggaacatgaccgacccgtcaaccgtcggcaatctgaccaacgacggcgat
attacgctgggcaacgcgagcggttcgacaggtacgctgctgacggtggacaataccctg
accttgcaggacggcagccagataaacgcgacgctggataccgccaacagcgcgccaatt
atcaaagccgccaacgtcacgctggacgggacgctgaaccttagctcaacggccaccttt
gtcgcgcccgaaaccgacgaacactttggatcgatcacgctgattgattcgcaaactgca
atcactaccgattttgacagcgtaacactggatgctgacacctccgctatgccggattat
ctgacgatcaacgcgggcgttgatgcgaatgataataccaactacgagttgtctacgggc
ttgagttggtacgcgggcgcaaattctgcgcgcgctgcgcatggcacttttaccgttgat
gcaggcagtacctttaccgtcaccagcgaactggacgaaaccacggcgacctccaactgg
aacggcagcaagctaaccaaacaaggcgacggcacgctgatcctcagcaacaccggcaac
gactacggcgatactgaaattgacggcggcattctggccgccaaagacgccgccgcgctc
ggcactggcgatgtgacgattgcagaaagcgcaacgcttgcgctgagccagggcacgctg
gataacaacgtgaccggcgagggccaaattgtcaaaagcggtagcgatgagctgatcgtg
accggcgataacaactacagcggcggcaccactatttccggcggtacgctgacggctgac
catgcggattcgctgggcagcggcgatatcgacaacagcggcgtgcttaaggtgggcgaa
ggcgagctggaaaacatcctttccggcagcggctcgctggtgaaaaccggcacaggcgag
ctgacgctaagcggcgacaacacttactccggcggcaccaccattaccggcggtacgctg
acggctgaccatgcggattcgctgggcagcggcgatatcgataacagcggcgtgcttaag
gtgggcgaaggcgatctggaaaatacgctttccggcagcggttcgctggtgaaaaccggt
accggcgagctgacgttaagcggcggcaacgattactccggcggcaccaccattatcggc
ggtacgctgacggctgaccatgcggattcgctgggtaccggagctgttgccaacagcggc
gtgcttcaggtcggcgagggcgagctggaaaatacgctttccggcagcggttcgctggtc
aaaaccggtacgggcgaactgacgttaagcggcgataacagttactccggcggcaccacc
attatcggcggtacgctgacggctgaccatgcggattcgctgggtaccggagctgttgcc
aacagcggtgtgcttcaggtcggcgagggcgagctggaaaatacgctttccggcagcggt
tcgctggtcaaaaccggtacgggcgaactgacgttaagcggcgataacagttactccggc
ggcaccaccattatcggcggtacgctgacggctgaccatgcggattcgctgggtaccgga
gctgttgccaacagcggtgtgcttcaggtcggtgagggcgagctggaaaatacgctttcc
ggcagcggttcgctggtcaaaaccggtaccggcgagctgacgttaggcggcgacaacagc
tattccggcgccaccactatcactgacggcacgctgattgccgccaacgtcaacgcgctg
ggcagcggcaatatcgacaacagcggtacgctgatactggatgccaacggcgcatttgag
cttgcgaacgtcaccacccatagcggcgccactaccgcgctggcagcgggcagcaccctt
gacgcgggccagttcacccaggaagacggcagtacgctaagtattgacctcggcgcggcc
accgacgacgccgtgattaccgccgacagcgtcgcgctgggcggcacgctgaatgttacc
ggcattggcagcgttacagacagctggacgcctgaggcatacacctacacgctgattggc
agcgacagcgccattacgaccgatttcgacgatctgaccgtcgcgggaatgaatagagaa
gatgttgacttcctgactatcgacggaaaagtcgatgaagcagacaacacccactatgat
ctgacggcctccctctcctggtatgcggacagagacaacgccactaccgacgcccacggc
acctttaccctgagcgaccctgacggcagctttaacgttgcggctacactgacagacgtt
gacgatacgctggatccgggtagcagatgggacggtaaatcgctgaccaaagaaggcgca
ggcacgctgatcctctctggcgacaacgactacagcggcggcaccaccatcaatgaaggt
acgctggtcgccgccagtacgacggcgctgggcaccggtctggtagacaataatgccacg
ctggtgctggacgcagacggtgaagtcagcgcggtgggcggcatcaccactcatagcggc
gcgacgacccaactggcgctcggcacctcgttggatctcggcgacagcgcgttaattcag
caagatggcagtacgctgaacgttgagctgaatagtgactcagtgcaaccgctgattacc
ggcagcagcgccacgcttggcggcgatttggtcgtcagcgacgccagcctgcaagcgcgc
gcctccgacgcggagttccagtcctttaaactgatggatatgaccagcgatatcagcggc
gactttaccagcctgacgatgaacctcactgacaagccggactatctgaccgtaaccggg
acaatcaatcctgaagatgcgtcagaatatctgcttaccgaagggctgagctggaatgcg
accgccacgtcagcgacgccagcacacggcacgtttaccctgggcgcaggcgacagtttt
gaagtcaccagcgtactgggcgataaaaccggcaacggcgactgggacggtaaatcgctg
accaaactgggcgcgggtaaactgacgctgagcggcgcgaacacctatagcggcgatacc
aacgtacaggaaggcacgctatggctgtccggagacggctcgattggcgagatgggcagc
cagcaggcggtgaacgtcgcctccggggcgaccttcggcggcagcaatggtacgaccgtt
aacggtaaggtgaccaacgaagggacgctggtcttcggcaacagcgaggaaacaggcgct
atcttcaccctcaatggcgatctgatcaacatggggacaatgaccagtggtagcagctcc
agcacgcctggcaatacgctttatgtcgatggcaattacaccggcaacggcggctcgctt
tacctgaataccgtcctgggcgacgatgattcggcaaccgataagttggtcattaccggc
gatgcttccggcaccaccgatctgtacatcaacggcatcggcgatggagcacagaccact
aacggtatcgaagtggtggatgttggcggcgtatcgaccagcgatgcgtttgagctaaaa
aatgaggttaacgccggtctgtatacctaccgtctgtactggaatgaaagtgacaacgac
tggtatctggcgtcaaaagcacagtctgatgatgacgacagcggcggtgatgacacgcct
tcggatggcggtgacgatggcggtaatgtcacgcctccggacgacggcggcgatggcggt
aatgtcacgcctccggacgacggcggcgacggcggcgatgtcacgcctccggaccacggc
ggcgatgtcgcaccgcagtaccgtgcggatatcggcgcgtacatgggcaaccagtggatg
gcgcgcaacctgcaaatgcagaccctctatgaccgcgagggcagccagtatcgtaatgcc
gatggcagcgtatgggcgcgcttcaaagcgggtaaagcggaatccgaggctgtcagcggc
aatatcgatatggacagcaactactcccagttccagttaggcggcgacattctggcctgg
ggtaacggccagcagagcgttaccgttggcgtcatggcgagctacatcaacgccgatacc
gacagcaccggtaaccgtggcgcagacggtagccagttcaccagtagcggcaacgtagac
ggctacaaccttggcgtctatgccacctggtttgccgatgcccaaacgcatagcggcgcg
tatgtcgacagctggtaccaatatggtttctacaacaacagcgtagagagcggtgatgcg
ggatctgaatcttatgattcaaccgctaacgccgtctcgctggaaactggttatcgctac
gatattgcgcttagcaacggtaatactgtcagtctgacgccgcaggcgcaggttgtctgg
cagaattactcagcggatagcgtgaaggataactacggcacccggattgatggtcaggat
ggcgacagttggacaacgcgtctgggtctgcgtgttgacggcaagctgtacaaaggcagc
cgtacggttatccagccgtttgctgaagctaactggctgcacaccagcgatgatgtgtcg
gtatcgtttgatgatgctacggtgaaacaggatcttccggctaaccgtgcggagctgaaa
gtgggtctgcaggcagatatcgataagcagtggagcgttcgcgctcaggttgccgggcag
actggcagcaatgactttggcgatctgaacggtagcctcaatctgcgctataactggtaa
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integrated database retrieval system
