KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2790
Entry
STM2790           CDS       T00065                                 
Symbol
ygaF
Name
(RefSeq) hydroxyglutarate oxidase
  KO
K15736  (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00310  Lysine degradation
stm01100  Metabolic pathways
stm01120  Microbial metabolism in diverse environments
Module
stm_M00956  Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:stm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    STM2790 (ygaF)
Enzymes [BR:stm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.5  With a quinone or similar compound as acceptor
    1.1.5.13  (S)-2-hydroxyglutarate dehydrogenase
     STM2790 (ygaF)
SSDB
Motif
Pfam: DAO Mqo Pyr_redox_2 NAD_binding_9 FAD_binding_2 NAD_binding_8 Thi4 Amino_oxidase Trp_halogenase
Other DBs
NCBI-GeneID: 1254313
NCBI-ProteinID: NP_461716
UniProt: Q8ZMM3
LinkDB
Position
2938848..2940116
AA seq 422 aa
MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGS
LKAQFCLAGNQATKTFCDQNNIRYDTCGKMLVATSELEMARMRALWERTAANGLEREWLS
AAELREREPNIIGLGGIFVPSSGIVSYRDVATAMANRFQAKGGEIIYHAEVSALTEHAAG
VVIRTSQGREIETATLIGCAGLMADRLVKMLGVEPGFIICPFRGEYFRLAPRHNRIVNHL
IYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLALKREGYRKRDVSFTDTLEIFRSAGIRR
VLQNHLLSGLGEMKNSLCKSGYLRRVQKYCPSLTVNDLQPWPAGVRAQAVSPDGKLIDDF
LFVTTPRSIHTCNAPSPAATSAIPIGAHIVSKVQALRASQSNPGRTLRAARSVDALHAAF
TR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtatgattttgtgattatcggcggcggcattatcggcatgtcgaccgccatgcaactt
attgatgtctacccggatgcgcgcatcgcgttgctggaaaaagagtccgcgccagcctgc
caccagaccgggcataacagcggcgtgatccatgccggggtgtactacacgcccggcagc
ctcaaagcgcagttttgtctggcaggcaatcaggcgaccaaaaccttttgcgatcaaaac
aacatccgctacgacacctgcggcaaaatgttggtcgccacctcggagctggaaatggcg
cggatgcgcgcgctatgggagcggacggcggccaacggcttagagcgcgagtggttaagc
gcggcggagctgcgtgaacgcgaacccaatatcattggcctgggcgggatttttgtccct
tccagcgggattgtcagctatcgcgatgtcgcgacggccatggcgaaccgctttcaggcc
aaaggcggcgagatcatctaccatgccgaggtcagcgcgctaacagaacatgccgctggc
gttgtcattcgcacctcgcaaggtcgggaaatagaaaccgctacgcttatcggctgtgca
ggactgatggcggatcggctggtcaaaatgctgggcgtggagcccggttttattatctgc
cctttccgcggcgagtactttcgtctggccccgcgacacaaccggatcgttaaccatttg
atctacccgatccccgatccggcaatgccgtttctcggcgtccatcttacccgcatgatc
gacggcagcgttacggtcgggccgaatgcggtgctggcgcttaaacgcgaaggctaccgt
aagcgcgacgtttccttcaccgacaccctggagattttccgctccgccggcattcgccgc
gtactgcaaaaccatctgctttccggactgggcgagatgaaaaactcgctgtgcaaaagc
ggctatttgcggcgagtacaaaagtattgccccagcctgaccgtcaacgatctccagccc
tggccggcaggcgtgcgggcgcaggcggtttcaccggacggcaaactgattgatgatttt
ctgtttgtcacaacgccgcgttccattcacacctgtaacgccccctccccggcggcgaca
tccgcgatacctatcggcgcgcatatcgtcagcaaagttcaggcgctacgcgcaagccag
agcaaccccggacgtacgctgcgtgcggcacgcagcgtggacgcattacacgccgcattt
acccgttaa

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