Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM2839
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Entry
STM2839 CDS
T00065
Symbol
ygaA
Name
(RefSeq) putative EBP family regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stm03000
]
STM2839 (ygaA)
Transcription factors [BR:
stm03000
]
Prokaryotic type
Helix-turn-helix
Other families
STM2839 (ygaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA
MCM
AAA_5
GAF_3
AAA_16
AAA_2
Motif
Other DBs
NCBI-GeneID:
1254362
NCBI-ProteinID:
NP_461760
UniProt:
Q8ZMJ8
LinkDB
All DBs
Position
complement(2983369..2984889)
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AA seq
506 aa
AA seq
DB search
MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLA
QDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFA
GQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQLESQNMLPGSSGVFE
PIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLFVPPLRE
RGDDVVLLAGYFCEQCRLRLGLSRVVLSPGARRHLLNYGWPGNVRELEHAIHRAVVLARA
TRAGDEVILEAQHFALSEDVLPAPPAESFLALPTCRNLRESTENFQREMIRQALAQNNHN
WAASARALETDVANLHRLAKRLGLKD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgtggaggtattggcgggcatcgccattgagttacaacgcggcattggg
catcaggatcgttttcagcggctgattactacgctgcgtcaggtgctggcgtgcgacgcc
tcggcgctgctgcgctatgaatcacgacaatttattccactggcgattgatggcctggcg
caggacgtcctcggcagacgttttaccctggaagggcatccgcgcctggaagccatcgcc
cgcgcgggggacgtggtgcgttttccggctgatagcgatttacccgatccgtatgacggg
ttaattcccggacaggaaagcctgaaagtccacgcctgtgttggtctgccgctgtttgcc
ggacagaacctcatcggtgcgctgacccttgatgctatgacgccggagcagttcgaggta
tttagcgatgaagaactacggcttgtcgccgcgctggccgccggggcattgagtaatgcg
ctgttaattgaacaactggaaagccagaacatgctgccggggtcgtcaggcgtgtttgaa
ccgataaaagagacgcacatgatcggcctgtcgccggcgatgacgcagttgaaaaaagag
atcgagattgtggcgggctccgatcttaacgtgctgatcggcggtgaaacggggaccggt
aaagagctggtggcgaaagctattcaccagggctcccccagagcggttaatccgctggtc
tatctcaactgcgccgcgctgccggaaagcgtggcggagagcgagttgtttggtcatgta
aaaggggcttttaccggggctatcagtaatcgtagcggtaagttcgaaatggcggataac
ggtacgctgtttctggatgagattggcgaactgtcgctggcgctacaggctaagctactt
cgcgtgttgcagtatggcgatattcagcgcgtcggcgacgatcgtagcctgcgcgtggac
gtgcgggtgttggcggcgaccaaccgtgacctgcgtgaagaggtgctggcagggcgtttt
cgcgccgatctgttccatcgcctgagcgttttcccgctctttgtgccgccgctgcgcgag
cgcggcgatgatgtggtgctgctggcgggctatttttgcgagcagtgccgactgcggctg
gggctgtcccgcgtggtactgagtcccggcgcacgtcgccatttgctcaactatggctgg
ccgggcaacgtccgggagctggaacatgccattcaccgtgcggttgtactggcgagagcg
acccgggcaggggatgaggtgatactggaggcacagcattttgccttgtcagaggacgtt
ttacccgcgccgcctgcggaaagctttctggcgctgccgacttgccgcaatttgcgcgaa
tcgacggagaacttccagcgagagatgattcgccaggcgctggcgcaaaataatcataac
tgggcggccagcgcgcgggcgctggaaaccgacgtcgccaacctgcatcggctggcgaag
cgtctgggactgaaggattag
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