Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM3114
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Entry
STM3114 CDS
T00065
Symbol
speC
Name
(RefSeq) ornithine decarboxylase isozyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00330
Arginine and proline metabolism
stm00480
Glutathione metabolism
stm01100
Metabolic pathways
stm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
STM3114 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
STM3114 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
STM3114 (speC)
Enzymes [BR:
stm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
STM3114 (speC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
1254637
NCBI-ProteinID:
NP_462030
UniProt:
Q8ZM37
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All DBs
Position
complement(3272780..3274915)
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AA seq
711 aa
AA seq
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MKSMNIAASGELIPRLSTHRNVVALDSTDFTDVAAVVITTADSRSGILALLKRTGFHLPV
FMLADEPVSAPVGVTAVIVGNAQEWLELENAACRYEAELLPPFYGTLTQYVDMGNSTFAC
PGHQHGEFFRKHPAGRHFYDFFGENLFRADMCNADVKLGDLLIHEGSAKHAQKFAAKVFN
ADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPVYLEAARNP
FGFIGGIDAHCFDETYLRDQIRDVMPESADASRPFRLAIIQLGTYDGTIYNARQVVDKIG
HLCDYILFDSAWVGYEQFINMMADTSPLRLELNENDPGIFVTQSVHKQQAGFSQTSQIHK
KDNHIRGQARFCPHKRLNNAFMLHASTSPFYPLFAALDVNAKIHEGESGRRLWAECVALG
IDARKAILARCKLLQPFIPLVVDGKPWQAYPTETIASNRRFFSFEPGAKWHGFEGYADDQ
YFVDPCKLLLTTPGIDADSGRYTEFGIPATILAHYLRENGIVPEKCDLNSILFLLTPAES
EEKLARLVAMLAQFERHIEDDTPLADVLPTVFQKYPVRYRDYTLRELCQEMHNLYVSFDV
KDLQKAMFRKESLPHVAMNPQDANSAFIRGDVELVRISEAGGRIAAEGALPYPPGVLCVV
PGEIWGGAAQRYFLALEEGINLLPGFSPELQGVYSETDADGIQRLYGYVLK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaatgaatattgccgccagcggtgaactcattccccgtctctccacccaccga
aacgtagtggcgctggacagtaccgactttaccgatgtggccgcagtcgtcattaccact
gccgacagccgtagcggtattctggcgttgcttaaacgcaccggttttcacctgccggtg
tttatgcttgcggatgaacccgtcagcgcgcctgtcggcgttacggcggtaatagtcggg
aacgcgcaggaatggctggagctggaaaacgctgcctgtcgctacgaagcggaacttctg
ccgcccttttatggcaccctgacccagtatgtcgacatggggaatagtacttttgcttgc
ccggggcaccagcatggcgaattttttagaaaacatcccgcaggccgccatttttatgac
ttttttggtgaaaacctgtttcgtgcggatatgtgtaacgccgatgtgaaacttggcgat
ctgctaatacatgaaggttctgccaaacacgcgcagaaatttgcggcaaaagtgtttaat
gcggataaaacctactttgtgctgaatgggacttcggcggcgaataaagtggtcaccaac
gccctgctgacgcgcggcgatctggtgctgtttgatcgtaataatcacaaatccaaccac
cacggcgccctgattcaggccggggcgacgccagtctatcttgaagcggcgcgtaacccg
tttggttttatcggtggcattgatgcgcactgttttgatgaaacgtacctgcgcgaccag
attcgtgacgtgatgccggaaagcgccgatgcgtcgcgtccgttccgcctggcgatcatt
cagctgggtacctatgacggcactatttacaacgcccgtcaggtggtggataaaatcggg
catctctgcgattacattctgtttgactccgcgtgggtaggctatgagcagtttatcaat
atgatggcggatacctcgccgttgcggctggagcttaatgaaaacgaccctgggatcttt
gtgacccaatcggtacataagcaacaggcggggttctcacaaacctcgcagatccacaaa
aaagataaccatattcgcggccaggcgcgtttttgcccgcacaaacgcctgaacaacgcc
ttcatgttgcatgcttcaaccagtccgttctacccgctgtttgcggcgctggatgtcaat
gccaaaatccacgaaggggagagcggtcgccgcctgtgggcggagtgcgttgcgctgggc
attgacgcgcgtaaagccattctcgcccgttgcaaactgcttcagccctttatcccactg
gtggttgacggcaagccgtggcaggcatatccgacggagaccattgccagcaatcgtcgt
ttcttcagttttgaacccggggcgaaatggcatggctttgagggctatgcggatgaccag
tattttgtcgacccctgtaaactgttactgaccacgccaggtattgatgccgatagtggg
cgatacaccgaattcggcatcccggcgaccattctcgcccactatctgcgtgagaacggt
attgtgcctgagaagtgcgatctcaactcgattctgttcttgctgacacccgccgagagc
gaagagaagctggcgcgactggtcgcgatgctggcgcaatttgaacggcacattgaagac
gatacgccgcttgcggatgtattgccgacggtttttcagaaatacccggtgcgctaccgc
gattacaccctgcgtgagctatgtcaggagatgcacaacctgtacgttagctttgacgtt
aaggatctgcaaaaagcgatgttccgcaaagaaagcctgccgcatgtggcgatgaaccca
caggatgccaacagcgcctttattcgcggcgatgtagagctggtgcgtatcagcgaggcg
ggcgggcgtattgctgccgagggggcattgccatacccgccgggcgtactgtgcgtggtg
ccgggggagatttggggcggcgcggcgcagcgttattttttggcgctggaagagggcatc
aatctgttgcctggtttttcgccggaattgcagggggtatatagcgagaccgatgccgat
ggaattcaacgcttgtacggatatgttttaaagtaa
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