Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM3175
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Entry
STM3175 CDS
T00065
Name
(RefSeq) putative bacterial regulatory helix-turn-helix protein
KO
K13652
AraC family transcriptional regulator
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stm03000
]
STM3175
Transcription factors [BR:
stm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STM3175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
HTH_AraC
Cass2
Motif
Other DBs
NCBI-GeneID:
1254698
NCBI-ProteinID:
NP_462090
UniProt:
Q8ZM00
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(3339323..3340189)
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AA seq
288 aa
AA seq
DB search
MNDLISAAYSERLRRVCDHIERHLDEPLSIEALSRMAHSSPFHFHRQFTTWSGLPLYRYI
QWLRLRRASWRLAFNPQDKVIDIALDAGFQNPESFTRAFKTAFGQSPRRFRQSPDWLAWH
QRVPKLALQEQHVMDVKIVEFPPTRVAMLTHLGHPDKVNASAAKFIAWRRETGQSPIASS
QTFGIAWHDPQTTPPAQFRFDICGSVRQPIAENDVGVVNSEIPGGRCAVVRHQGSLDSLP
ESVWYLFREWLPASGETPRDFPVFFQYLNFVHEVAEHELLTDIYLPLR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctgatcagcgcggcttattccgaacgtctgcggcgcgtttgcgaccacatt
gagcgtcatctggatgagcctctgtcgattgaggcgttaagccggatggcgcacagctcg
ccgtttcattttcaccggcagtttaccacctggagcgggcttccgctctatcgctatatc
cagtggttgcgtttgcgccgcgcgtcatggcggctggcgtttaacccgcaggataaagtt
atcgatatcgcgctggatgccgggtttcagaatccggagtcgttcacacgtgctttcaaa
accgcgtttggtcaaagcccgcgccggtttcggcaatcgccggactggctggcctggcac
cagcgcgttcctaaacttgcgttacaggagcagcatgtcatggacgtaaaaatcgttgaa
tttccacctacccgcgtcgcgatgctgacgcatctggggcatccggataaggtcaacgcc
agcgcggcgaaatttattgcatggcgacgcgaaacgggccagtcgccgattgccagcagt
caaacttttggtattgcctggcacgacccgcagacgacgccgccggctcaattccgcttt
gatatctgcggcagcgtccgccagccgatagccgaaaatgacgttggcgtggtgaatagc
gagattcctggcgggcgctgcgcggtggtgcgccatcagggatcgctcgacagcctcccg
gagagcgtgtggtatttattccgcgaatggctacccgccagcggtgagacgccgcgcgat
tttccggtcttcttccagtacctgaatttcgtccatgaggtcgcggaacatgagctgctg
acggatatctatctgccgcttcgttaa
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integrated database retrieval system
