Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM3504
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Entry
STM3504 CDS
T00065
Symbol
yhgF
Name
(RefSeq) putative RNase R
KO
K06959
protein Tex
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
STM3504 (yhgF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
YqgF
S1_RRP5
OB_PDCD11
T2SSK
HHH_6
Motif
Other DBs
NCBI-GeneID:
1255027
NCBI-ProteinID:
NP_462407
UniProt:
Q8ZLJ1
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Position
3661137..3663464
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AA seq
775 aa
AA seq
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MNDSFCRIIAGEIQANAGQVEAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLG
YLRELEDRRQAILKSISEQGKLTDELAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA
GLEPLADLLWNEPSHDPDVEAAKYIDGDKGVADTKAALDGARYILMERFAEDAALLAKVR
DYLWKNAHLVATVVSGKEEEGAKFRDYFDHHEPIANVPSHRALAMFRGRNEGILQLSLNA
DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE
RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDGTGKLVATDTIYPHT
GQAAKAATVIAALCEKYHVELVAIGNGTASRETERFYLDVQKQFPNVTAQKVIVSEAGAS
VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR
KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR
LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSNELRHLK
AADFTDDKFGVPTVSDIIKELEKPGRDPRPEFKTAQFADGVETMNDLLPGMILEGAVTNV
TNFGAFVDIGVHQDGLVHISSLSTKFVDDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL
DEQPGETAARRGGGADRAQGNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaatgattctttctgccgcattattgcgggtgaaatccaggcaaatgccggacaggtt
gaagctgccgttcgcctgcttgacgaagggaacaccgtgccgtttatcgcacgttatcgt
aaagaaatcaccggcggtctggatgacacgcagttgcgtaacctggaaacgcgtctgggc
tatctgcgtgagctggaagacaggcgtcaggccatcctcaagtccatttccgaacaaggc
aaactgaccgatgagctggctggcgccatcaacgctacgttaagtaagaccgagctcgaa
gacctctacctgccctataaacctaaacgccgcacccgtggacaaatcgccattgaagcc
ggccttgagccgctggccgatctgctctggaacgagccgtcccacgatcctgacgtggaa
gcggcaaagtacattgatggcgacaaaggcgtggcggacacgaaagccgcgctcgacggc
gcacgctacattctgatggagcgctttgccgaagacgccgcattgctggcgaaagtacgt
gattacctgtggaagaacgcccatctggtcgccaccgtcgtgagcggcaaagaggaagaa
ggggcaaaattccgcgactatttcgaccatcatgagcccattgctaacgtcccgtctcac
cgtgcgctggccatgttccgtggtcgtaacgaaggcattctgcaactttcgctcaatgcc
gacccacagtttgatgagccgccgaaagagagctactgcgagcaaatcatcatggaccat
ctcggcctgcggctaaataacgccccggcggatagctggcgcaaaggcgtagtgagctgg
acgtggcgtatcaaagtcttaatgcacctcgaaaccgaactgatgggcaccgtgcgcgaa
cgtgcggaagacgaagcgattaacgtgtttgcgcgtaacctgcacgacctgctgatggca
gcccccgcaggcctgcgcgccacgatgggccttgatcctggcctgcgtaccggcgtaaaa
gtcgctgtcgttgacggcaccggcaagctggtggcgacggataccatttatccgcatacc
ggtcaggcggccaaagcggctaccgtgatcgccgcgctgtgcgaaaaataccacgtcgaa
ctggtcgcgattggcaacggtacggcctcgcgtgaaaccgaacgcttctatctcgacgta
caaaaacagttcccgaacgtgacggcgcagaaagtgatcgtcagcgaagcgggggcgtcc
gtgtattccgcttctgagctggcggcgcaggagtttccggatctcgacgtctccctgcgc
ggcgcggtctctatcgcgcgtcgtctacaggatccgctggcggaactggtgaaaatcgat
ccgaaatccatcggcgtcggccaatatcaacacgatgtcagccagacccagttggcccgt
aaactggatgcggtggtcgaagactgcgtaaacgccgtcggcgtcgatttgaataccgcc
tccgtgccgctgctgacccgcgtcgcgggcttaacgcgcatgatggcgcaaaacatcgtc
gcctggcgcgatgagaacggtcagttccagaaccgccagcaactgttgaaggtgagccgt
ctggggccgaaagcgtttgagcagtgcgcgggcttcctgcgtattaaccacggcgataac
ccgctggatgcgtccaccgtccacccggaagcctatccggttgtcgaacgcattctggcg
gcgacgcagcaagcgctaaaagatctgatgggcaacagcaacgaattgcgccacctcaag
gccgctgattttaccgacgataaattcggcgtgccgaccgtgagcgatatcatcaaagag
ctggaaaaaccgggccgcgacccgcgtcctgaatttaaaaccgcgcaattcgccgatggc
gttgaaaccatgaacgacctgctaccggggatgattctggaaggggcggtcactaacgtc
accaatttcggcgcgtttgtcgatatcggcgttcatcaggatggcctggtccacatctct
tccctgtcgactaagttcgtcgacgatccacacaccgtggtaaaagctggcgacatcgtg
aaggtgaaagtgctggaagtggatctgcaacgtaagcgtattgcgctgacgatgcgtctg
gacgaacagcccggcgaaaccgccgctcgccgcggcggcggcgccgatcgcgctcagggc
aaccgcccggcatcaaaagcggcgaaaccgcgcggtcgtgacgcccagccagccggtaac
agcgccatgatggacgcgctggcagccgcaatgggaaaaaaacgctaa
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