Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM3947
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Entry
STM3947 CDS
T00065
Symbol
dapF
Name
(RefSeq) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00300
Lysine biosynthesis
stm00470
D-Amino acid metabolism
stm01100
Metabolic pathways
stm01110
Biosynthesis of secondary metabolites
stm01120
Microbial metabolism in diverse environments
stm01230
Biosynthesis of amino acids
Module
stm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STM3947 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STM3947 (dapF)
Enzymes [BR:
stm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
STM3947 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
1255473
NCBI-ProteinID:
NP_462832
UniProt:
P0A1F2
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All DBs
Position
4152272..4153099
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AA seq
275 aa
AA seq
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MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFH
YRIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMG
EPNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVL
ESHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVR
VELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggta
acgcagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggc
gtagggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcat
taccgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgt
ttcgcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtacc
gcgaatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggg
gaaccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtat
attatgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcac
tgtgtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctg
gaaagccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgt
gagcatatccggctgcgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagc
ggcgcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgc
gtggaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatac
atgactggtccggcggcacatatctacgacggatttatccatttatga
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