KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4074
Entry
STM4074           CDS       T00065                                 
Symbol
ego
Name
(RefSeq) putative ABC-type sugar aldose transport system
  KO
K10558  AI-2 transport system ATP-binding protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM4074 (ego)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM4074 (ego)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM4074 (ego)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    STM4074 (ego)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_30 AAA_22 RsgA_GTPase AAA_29 KdpD MukB eRF1_3 PhetRS_B1 AAA_23 AAA_27
Other DBs
NCBI-GeneID: 1255601
NCBI-ProteinID: NP_462955
UniProt: Q8ZKQ4
LinkDB
Position
4283514..4285049
AA seq 511 aa
MQISHNTASPLICVQNIYKSYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGI
VPPDGGTIDIAGVRCSHLTPLKAHQYGIYLVPQEPLLFPSLSVRENILFGLQGRQASTEK
MQQLLKAMGCQLDPASAAGTLDVADRQIVEIMRGLMRDSRILILDEPTASLTPAETDRLF
TRLQELLKKGVGIVFISHKLPEIRQLAHCVSVMRDGKIALFGKTHDLSTDEIIQAITPAT
QGVSLSANQKLWLELPGSRPQNERGATVLALESLTGEGFMNINLEVRAGEILGLAGLVGA
GRTELAETLYGIRPVNAGRMLFNGQEINALTTQQRLQLGLVYLPEDRQSSGLYLDASLAW
NVCSLTHNQKGFWIKPQRDNATLERYHRALNIKLNNAEQAARTLSGGNQQKVLIAKCLEA
SPQLLIVDEPTRGVDVSARSDIYQLLRSIAQQNVAVLFISSDLEEIEQMADRVYVMHQGE
LGGPALCGEEINVDTIMHVAFGEHGASEATC
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgcaaatcagtcacaatactgcatcccctctgatttgtgtgcagaacatttataaaagt
tattccggcgtcgaagtactaaagggaattgactttactctgcatgcgggagaggtgcac
gcattgcttggcggcaatggtgcgggtaaatcaacattaatgaagattattgccggtata
gtcccgccagatggagggactatcgatattgctggtgtgcgttgcagtcatttaacgcct
ctgaaggcgcaccagtatggcatttacctggttccccaggagcctctgttatttccgagt
ttatctgtgcgggaaaatatcttgtttggcttgcagggacgtcaggcctccacggaaaaa
atgcagcagctattaaaggcgatgggatgccaactcgatccggcgagcgctgcgggtacg
cttgatgttgcagaccgccagatcgttgaaattatgcgcggcttgatgcgcgactcgcga
atcttaattcttgatgagcccacggcgtcgttaacgccagccgaaactgatcggttattt
acgcgtctgcaagagttgctgaaaaagggtgtcggaattgtatttatttctcataagcta
ccagaaattagacagttagctcactgcgttagcgtgatgcgtgacggtaaaatcgcatta
ttcggaaaaacgcatgacctttctaccgacgagattattcaagctatcaccccggcaacg
cagggcgtcagtctttccgcgaatcaaaagttgtggctggaattgcctggcagccgcccg
cagaacgaacgcggcgcgacagtattagcgctggagtcactgacgggcgaaggttttatg
aatatcaaccttgaggtgcgggcaggcgaaatccttggtctggccgggttggtcggcgcg
ggacgcacagaactggctgaaacgctgtacggtattagaccggtcaatgcggggcggatg
ctgttcaatggtcaagaaattaacgccctgacaacccaacagcggttgcagctcggcctg
gtctatttgccggaagatcggcagtcatccgggctgtatcttgacgcttccctggcatgg
aatgtctgttcgctgacccacaaccaaaaaggattttggataaagccccagcgggataac
gccacccttgaacgttaccaccgcgcgttaaatatcaaactcaataatgccgaacaggcg
gcgcgtactttatccggcggtaaccagcaaaaagtattgattgccaaatgcctggaggcc
tctccgcaattactgattgtcgatgaaccgacccgcggtgtcgatgtctccgcccgcagc
gatatttatcagctgttgcgcagtatcgcgcaacaaaatgtcgcggtgctatttatttcc
tccgatctggaagagatagagcagatggccgatcgcgtatatgtcatgcaccagggggaa
ctgggggggcctgcgttatgcggcgaggaaattaacgttgataccatcatgcacgttgcg
tttggcgaacatggtgcgtcggaggcaacatgttga

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4075
Entry
STM4075           CDS       T00065                                 
Symbol
ydeY
Name
(RefSeq) putative sugar transport protein
  KO
K10556  AI-2 transport system permease protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM4075 (ydeY)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM4075 (ydeY)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM4075 (ydeY)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    STM4075 (ydeY)
SSDB
Motif
Pfam: BPD_transp_2
Other DBs
NCBI-GeneID: 1255602
NCBI-ProteinID: NP_462956
UniProt: Q8ZKQ3
LinkDB
Position
4285043..4286086
AA seq 347 aa
MLKFIQNNREATALLAIVCLFVFPGALDSQYLSVQTLTMVFSSAQILMLLAIGATMVMLT
RNIDVSVGSTTGMCAVLLGVMLNAGYSLPVACLATLILGIVAGFFNGVLVAWLKIPAIVA
TLGTLGLYRGIMLLWTGGKWIEGLPAGLKQLSAPVFLGISAIGWFTLVLALLMAWLLAKT
AFGRNFYATGDNLQGARQLGVRTEMVRIMAFSLNGGMAALAGIVFASQIGFIPNQTGTGL
EMKAIAACVLGGISLLGGSGTVIGAILGAYFLTQIDSVLVLLRIPAWWNDFIAGLVLLGV
LVFDGRLRCALQRNLRRQKYARFISPPTPLQTEAKTHAQQNKNKEVA
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgttgaaattcatccaaaataaccgggaagcgacggcactgctggcaatagtctgttta
ttcgtgtttcctggcgcgctggatagtcagtatttgagcgtgcaaacgctgacaatggtt
ttcagtagcgcgcaaattttgatgctgttggcgattggcgcgacgatggtaatgctcacc
cgcaatattgatgtatcggtgggctcgacgacaggaatgtgcgcggtattgctgggagtg
atgttaaacgccggctatagcctgccggtcgcctgcctggccacactaatattaggaatt
gtcgccggattttttaatggcgtactggttgcctggttgaagatacccgccattgtcgcc
actctgggaacgctgggcttgtatcgtgggatcatgctgctatggacaggggggaaatgg
attgaaggattacccgcaggcttaaagcaactctctgctccggtgtttctgggaatttcc
gcaatcggctggtttaccctggtgttagcgctgcttatggcctggctcctggcgaaaacc
gcctttggccgcaatttttacgccaccggcgataacctgcagggcgcccggcaattgggt
gtccgtaccgagatggtacgcatcatggcattttcacttaatggcggtatggcggcattg
gctggaatcgtgtttgcctcgcagattggcttcattcccaatcaaaccggcacggggctg
gaaatgaaagccatcgcggcctgcgtattggggggaattagcctgttaggcgggtcaggc
acggtcatcggcgctattctcggcgcttattttcttacgcaaatcgatagtgtgttagtg
ctgctgcgtatccccgcctggtggaacgattttattgctggcctggtattgttgggcgta
ctggtattcgatgggcggctgcgttgcgcattacaacgcaatctgcgccgccagaaatat
gcccgttttatatcaccacccactccactacagacggaagcaaaaacgcacgcacaacag
aataaaaacaaagaggtggcatga

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4076
Entry
STM4076           CDS       T00065                                 
Symbol
ydeZ
Name
(RefSeq) putative sugar transport protein
  KO
K10557  AI-2 transport system permease protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM4076 (ydeZ)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM4076 (ydeZ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM4076 (ydeZ)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    STM4076 (ydeZ)
SSDB
Motif
Pfam: BPD_transp_2 Gln_amidase_like
Other DBs
NCBI-GeneID: 1255603
NCBI-ProteinID: NP_462957
UniProt: Q8ZKQ2
LinkDB
Position
4286083..4287084
AA seq 333 aa
MMNPWRRYSWEIALAALLIFEILAFGLINPRLLDINVLLFSTSDFICIGIVALPLTMVIV
SGGMDISFGSTIGLCAITLGVLFQLGMPLPLAIIITLLLGAICGLINAGLIIYTGVNPLV
ITLGTMYLFGGSALLLSGMAGATGYEGIGGFPTAFTDFANISFLGIPMPLIFFLVCCLFF
WLLMHRTHMGRNVFLIGQSARVAQYSAIPVNRTLYTVYAMTGCASAIAAVLLVSYFGSAR
SDLGASFLMPAITAVVLGGANIYGGSGSIMGSALAALLVGFLQQGLQMAGVPNQISSALS
GALLIVVVVGRSVSLHRHQILEWYSRRRNAHQA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgatgaatccatggcgacgctatagctgggaaattgcgctggcagccttattgatcttt
gaaattctggctttcggtctgattaatccacgtttattagatattaatgtcttacttttt
agcactagcgattttatttgtatcggtattgtcgctttgccgctaacaatggttattgtc
agcggtggtatggatatttcatttggttctacaatcgggctatgcgcgattaccctgggt
gtgctgtttcagctcggtatgccgctacctttagcgattattattaccctactacttggc
gcaatatgtgggctgataaatgccggacttattatttataccggcgtaaacccgttggtg
attaccctgggaaccatgtatttatttggtggtagcgcattattgttatctggtatggct
ggcgccacgggttatgaaggtattggtggatttcccacagcgttcactgactttgccaat
atttcatttcttggtattcccatgccgcttattttttttcttgtgtgctgtctgtttttc
tggctgctcatgcatcgtacgcatatgggacgcaacgttttcctgattggccagagcgcc
cgtgtcgcgcagtacagcgcgatcccggtgaatcgcacgttgtataccgtgtatgccatg
accggatgcgcctccgcgatcgccgccgtattactggtttcttactttggctccgcacgt
tcggatctgggcgcctctttcctgatgccggccattacggcggttgtgctgggaggcgcc
aatatttatggcggctccgggtcgattatggggtccgcgttggcggcgctgctggtggga
tttttacagcaggggctacagatggccggagtgccgaatcaaatttccagcgcattgtcc
ggtgcgcttctcattgttgttgtcgttggtcgttccgtcagtttgcatcgtcaccaaatc
cttgaatggtactcacgccgtcgcaatgcgcatcaggcatga

KEGG   Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4077
Entry
STM4077           CDS       T00065                                 
Symbol
yneA
Name
(RefSeq) putative sugar transport protein
  KO
K10555  AI-2 transport system substrate-binding protein
Organism
stm  Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm02010  ABC transporters
stm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:stm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STM4077 (yneA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    STM4077 (yneA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:stm02000]
    STM4077 (yneA)
Transporters [BR:stm02000]
 ABC transporters, prokaryotic type
  Saccharide, polyol, and lipid transporters
   AI-2 transporter
    STM4077 (yneA)
SSDB
Motif
Pfam: Peripla_BP_4 Glyco_tran_WecG DUF6848 Peripla_BP_6
Other DBs
NCBI-GeneID: 1255604
NCBI-ProteinID: NP_462958
UniProt: Q8ZKQ1
Structure
LinkDB
Position
4287113..4288135
AA seq 340 aa
MARHSIKMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDV
TYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTK
PECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQ
EHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNL
AIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIG
KVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggcaagacacagcattaaaatgatcgccttactcactgcgtttggtctggcatctgcg
gcaatgaccgtgcaggcggcagagcggattgcttttattcccaaactggttggcgtgggc
ttttttaccagcggcggcaatggcgcgcaggaagcgggaaaagcgctgggcattgacgta
acttacgatggccctacagagcccagcgtctcaggccaggttcaactggtgaataacttt
gtcaatcaggggtatgacgccattatcgtttctgccgtttcgcctgatggcctgtgcccg
gcgttgaagcgggcaatgcaaagaggcgtgaaaatattaacctgggattccgataccaag
ccggagtgccgttcttactatatcaatcaagggacgccaaaacagctcggcagcatgctg
gtagagatggccgctcatcaggtggacaaagagaaagcgaaagtcgctttcttctattcc
agcccaacggtgaccgaccagaaccagtgggtgaaagaagctaaagccaaaattagccag
gaacatccggggtgggagatagtcactacccagtttggctataacgatgccacgaaatcg
ctccagacggcggaaggtatcatcaaagcgtatcccgatctggatgccatcatcgcgcct
gacgctaacgctttacctgctgcggcacaggcggcggagaaccttaaacgcaataatctc
gcgattgttggttttagtacgccgaatgtaatgcgcccttatgttcagcgcggcactgtt
aaagagtttggcctgtgggatgtcgtccaacagggaaaaatttccgtatatgtcgccaat
gcgttgctgaaaaatatgccaatgaatgtcggtgattcactggatattcccggcatcggc
aaagtcaccgtttcacctaatagtgagcagggatatcactatgaggcaaaaggtaacggc
attgtgttattgccggagcgtgtcattttcaacaaagacaatatcgacaaatatgatttc
tga

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