Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4095
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Entry
STM4095 CDS
T00065
Symbol
priA
Name
(RefSeq) factor Y
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STM4095 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stm03400
]
STM4095 (priA)
Enzymes [BR:
stm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STM4095 (priA)
DNA repair and recombination proteins [BR:
stm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STM4095 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
IBR_1
Motif
Other DBs
NCBI-GeneID:
1255622
NCBI-ProteinID:
NP_462976
UniProt:
Q8ZKN8
LinkDB
All DBs
Position
complement(4303374..4305572)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVGIVVSISDHSELPLDEL
KSVIEILDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHALPVLLRQGKPASNAPLWYWFA
TEEGQAVDINSLKRSAKQQQALAALRQGKIWRYQVAELDFTDATLQTLRRKGLCELASET
PAFTDWRERYAVAGERLRLNTEQATAVGAIHSASDGFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQRLQAGLAPALIARMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG
STHMLPVGLGTEQLEQVLAPFFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAPVFLQQLRNLI
QASPLSDDKLWILGPVPALAPKRGGRYRWQILLQHPSRIRLQHIISGTLALINTLPEARK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgcacgttgccttgcccgttccgcttccccgaacctttgattacctgctg
ccggaaggcggggtcgccaaagccgggtgccgcgtgcgcgtgccattcggcaagcagcaa
gagcgcgtgggcattgtcgtctcgattagcgaccacagcgaattgccgctcgatgaatta
aaatcggtcattgaaatcctggataacgagccaatcttttctccctccatctggcgctta
ctcctctgggcggcggattactaccaccatcccctcggcgacgttctgtttcacgctctg
ccggttttattgcgtcagggaaaaccagccagcaacgcgcccctatggtattggttcgcc
accgaagaggggcaagccgtcgatatcaacagcctgaaacgctccgccaaacaacaacag
gcgctggcggcgctacggcaaggaaagatctggcgctatcaggtagccgagcttgatttt
actgacgccacgctgcaaacgctgcggcgtaagggactttgtgagcttgccagtgaaacg
cccgcgtttaccgactggcgggagcgttatgccgtcgcaggagagcgcctgcggctgaat
accgaacaggcgacagcagtcggcgcgattcacagcgcgtcggacggtttctccgcctgg
ttgctggcaggcgtaaccggttccggcaagaccgaagtgtatctgagcgtgctggaaaac
gtcctcgcccagggcaaacaggcgctggtgatggtgccggaaatcggcctgacgccgcaa
acgatcgcccgttttcgcgaacgttttaacgcgccggtggaagtgctgcattccgggcta
aacgacagcgagcgtctttcggcatggctgaaagcgaaaaacggcgaagcggcgattgtc
atcggcacgcgttcctcgctgtttacgccgtttaaaaatcttggcgtgattgtcatcgac
gaagagcacgacagctcttataaacagcaggaagggtggcgctaccacgcccgcgatttg
gcagtgtatcgcgcccatagcgagcagatcccgattattctcggctccgccaccccagcc
ctggaaacgctatgtaacgtgcggcagaaaaaataccggatgctgcgtctgacgcggcgc
gcaggcaacgcccgcccagctctgcagcatgtgctggatttaaaaggccagcgtcttcag
gcgggactggcgcccgcccttatcgcccgtatgcgccaacatctccaggccgacaatcag
gtaattttatttcttaaccgccggggattcgcgcccgcgctgctttgccacgactgcggc
tggattgcagagtgcccgcgttgcgatcactactacacgctgcaccaggcgcagcatcat
ttacgctgtcatcactgcgacagccagcgtccggtaccgcgtcagtgcccctcctgcggc
tccacacatatgttaccggttgggttagggacggaacagctggagcaggtgctggcgccc
ttcttccccggcgtgccgatctcacgaatcgaccgtgataccaccagtcgtaaaggcgcg
ctggagcagcatctggcggaagttcaccgcggcggagcacgcatcctgataggcacacaa
atgctggcgaaaggccatcactttccggatgtcacgctggtggcgttgctggatgtcgat
ggcgcgcttttttccgcagattttcgttcggcggaacgcttcgcccagctctacactcag
gtttccggccgcgccgggcgcgcgggcaaacagggcgaagtggtgctccaaacgcaccat
cctgagcatcccctgctgcaaacgttactgtataaaggctatgatgcgtttgcggagcag
gcgctggcggaacggcaaacgctccagcttccgccgtggaccagccacgtcattattcgc
gcagaggatcataacaatcagcaggcgcccgtctttctccaacagttgcgtaatctgatt
caggccagcccgctatcagacgataagctgtggatcttaggtccggttccggccctcgcg
ccaaaacgcggcggccgctatcgctggcaaattttacttcagcatccttcacggattcgc
ctgcaacacatcatcagcggcacgctggcgttgatcaatacgctcccggaagcgcggaaa
gttaaatgggttctggacgtcgatccgattgaaggatag
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