Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4138
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Entry
STM4138 CDS
T00065
Symbol
birA
Name
(RefSeq) biotin operon transcriptional repressor
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Pathway
stm00780
Biotin metabolism
stm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
STM4138 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stm03000
]
STM4138 (birA)
Enzymes [BR:
stm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
STM4138 (birA)
Transcription factors [BR:
stm03000
]
Prokaryotic type
Helix-turn-helix
Other families
STM4138 (birA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
HTH_11
HTH_24
MarR_2
HTH_5
HTH_Crp_2
FloA
Linker_histone
Motif
Other DBs
NCBI-GeneID:
1255664
NCBI-ProteinID:
NP_463012
UniProt:
P37416
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All DBs
Position
4357710..4358672
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AA seq
320 aa
AA seq
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MKDTTVPLTLISLLADGEFHSGEQLGERLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSL
PEPIQLLDADRIHSQLDSGNVAVLPVIDSTNQYLLDRIGELRSGDACVAEYQQAGRGRRG
RKWFSPFGANLYLSMYWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLL
DRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEEDVINQGWITLQEAGITLDRNMLAA
KLIYKLRAALELFEQEGLSPYLSRWKKLDNFIDRPVKLIIGDKEIFGISRGIDTQGALLL
EQDGVIKPWMGGEISLRSAE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatactaccgttcccctgacgctgatctcactacttgccgacggagagtttcac
tcaggcgagcagttgggtgaacggctgggaatgagccgcgcggctattaataaacatatc
cagacattacgcgactggggagtagatgtatttaccgttcccgggaaaggatatagctta
ccggaacccatccagttactggatgctgaccgtatacatagccaactggatagcggaaac
gtggcggtattgcccgttatcgattcaaccaatcagtatttacttgatcgaattggcgag
ctgcgctcaggcgatgcctgtgtagcagaataccaacaggcggggcgtggtcgtcgcggg
cgtaaatggttctcaccgtttggcgcgaatctatatctttcaatgtactggcgtctggag
cagggccctgcggcggcaataggcctgagtctggtcattggaattgtgatggcggaagtg
ctgcgtaaactgggcgcagataaagttcgtgtgaagtggcctaacgacctttacctactg
gaccgcaaactggcgggtattctggtcgagttaaccggtaaaacgggcgatgccgcacaa
atagtgattggcgctggtattaacatggcaatgcgtcgcgtagaagaggacgtgataaat
cagggatggatcacactacaagaggccggaattacgctcgaccgcaatatgctggccgca
aagctgatttataagctacgtgctgcgcttgagctttttgagcaagaaggtctttctcct
tatctttcgcgctggaaaaaactggataattttattgatcgcccggtaaaactaattatt
ggtgacaaagaaatatttggtatttctcgcggcattgatactcaaggcgcattattgctt
gaacaggatggcgtgattaaaccctggatgggcggagaaatatcgctgcgaagcgccgaa
tag
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