Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4489
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Entry
STM4489 CDS
T00065
Name
(RefSeq) putative superfamily I DNA helicases
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
PLDc_2
AAA_30
Viral_helicase1
AAA_19
ATPase
AAA_16
AAA_22
NPHP3_N
GvpD_P-loop
T2SSE
NACHT
ABC_tran
DEAD
AAA
NB-ARC
AAA_25
nSTAND3
UvrD_C_2
Rad17
JCAD
Motif
Other DBs
NCBI-GeneID:
1256015
NCBI-ProteinID:
NP_463348
UniProt:
Q8ZK18
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All DBs
Position
4731981..4735496
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AA seq
1171 aa
AA seq
DB search
MDDNALGFASYWRNSLADAESGKGSFERKDAKNFTHWHGIAAGRLDETIVGKFFEGEKDD
VETVDVILRPKVYFRLLQRGKDHSAGAPDIVTPIVTPALLSREGFLYPTPATSIPRDLLE
PLPKGAFSIGEIEQYDKYKTTHTSFSINFDDRVDKTAETDEEREARYAAWQQDWRQYLDD
SERLLKNVVGDWIKNPEQYELAEHGYIVKTAQSGGASFHILSLYDHLLVCKKDVPLFNRF
ASREVHAAESLLPPEAKFSDRIGHSGDKFPLAKAQRDALSHFLDARHGDILAVNGPPGTG
KTTLVLSIIATQWARAALEKAEPPVIIATSTNNQAVTNIIEAFGKDFSQGTGAMAGRWLP
ELKSFGAYFPSSTRKAEAAKKYQTEDFFNQVESKEYVEDALLFYLEKAKAAFPEKECSSP
EKVIELLHGQLAAKSEQLVRLNATWQTLSQVRATRELIDNDIEQYLDNLNKLLSGQEQKV
TQLKSAKAEWKKYRASESLIYPLFSWLPVVRSKRQYQIQLFLEDKLGALIAGNQWSDPET
IERNIDRLLNSAEREQTTYRQQIDSAHEIVLKEQQAAQEWQRLALDLGHEGDEELSFSQA
DELADTQIRFPAFLLTTHYWEGRWLMDMAGIDDLQKEKGKKGAKGVTARWQRRMKLTPCV
VMTCYMLPGNMQISEHKGQRKFEKSYLYDFADLLIVDEAGQVLPEVAAASFALAKKALVI
GDTEQIPPIWSITPAIDIGNMLAEKILSGSTQEEITEKYTAIAELGKSAASGSVMKIAQC
ASRYQYDPELARGMYLYEHRRCFDNIIGYCNTLCYHGKLLPKRGCEESNLMPAMGYLHID
GKGELASSGSRYNLLEAETIAAWLTDNQQSIEAHYGKSLHEVVGIVTPFSAQVPTIKQAL
DKQGISAGTNETSLTVGTVHSLQGAERAIVIFSPVYSKHEDGAFIDSDNSMLNVAVSRAK
DSFLVFGDMDLFEIQPASSPRGLLAKYLFESEKNALTFDYKERKDLKTAETKIYTLHGVE
QHDNFLNQTFENTDKHITIVSPWLTWQKLEQTGFLDSMITACSRGINVTVVTDRSYNTEH
NDFEKRKEKQQNLKAALEKLNALGIATKLVNRVHSKIVIGDDGLLCVGSFNWFSATREAR
YERYDTSMVYCGDNLKGEIEAIYNSLDRRQV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaatgctttagggtttgcctcatactggcgcaattcgctggcagatgctgag
tcaggaaagggcagttttgaacgcaaagacgccaaaaatttcacccactggcatgggata
gcggcgggacgtcttgacgaaacgatcgttggtaaattttttgagggagaaaaagacgac
gtcgaaacagtcgatgtcatcttgcggccaaaggtttatttccggttactgcagcgtgga
aaggaccattccgctggtgcgcctgatattgttaccccgatagtgacgccagccctattg
agccgtgaaggttttttatatccgacgccagcgacctccattcccagagacctgcttgaa
cctttgccaaaaggggcattttcaattggtgagattgagcagtacgacaaatacaaaacg
acacatacgtcattctctatcaactttgatgaccgcgttgataagaccgccgaaacagat
gaagaacgagaagcacgatatgcagcctggcagcaggattggcgtcaatatctggatgat
tcagaaaggctgctgaagaacgttgtcggcgactggattaaaaatcctgagcaatatgaa
ctcgctgagcacggttatattgttaaaacggcgcaatctggcggcgccagtttccatatc
ctttcactttatgatcacctgcttgtttgcaaaaaggatgtgccgctcttcaatcgtttc
gcctcgcgagaggttcatgctgcagagtcattacttcctccggaagcaaaattcagcgac
aggattggacactccggggataagtttccgctggcaaaggctcagcgcgatgccttaagc
cattttctggatgcgaggcatggcgatatccttgccgttaatggtcccccgggaaccgga
aaaaccacgctggtgctttctatcatcgccacgcagtgggcccgagcggctctcgaaaaa
gcggaacctccggttattatcgcgacttcaacgaataaccaagctgtaacgaacattatc
gaggcgttcgggaaagatttttcccaaggcactggtgcaatggccggacgatggttgccg
gagctgaaaagcttcggcgcttattttccctcaagcactcgtaaagccgaggccgccaaa
aaatatcaaactgaagatttcttcaaccaggttgagtcaaaagagtatgtagaggatgca
ctgctgttttatctggagaaagctaaggcagcctttcctgaaaaagagtgttcatcccct
gaaaaggttattgaactcctgcatggtcagttggcagcaaaatccgagcaactggtaaga
ctgaacgcaacatggcaaacgttaagccaggttcgggcaacgcgagagcttattgataac
gacattgagcaatatctcgataatttaaataaattactctccgggcaagaacaaaaagtt
actcaactaaaaagtgctaaagcggaatggaaaaaatatcgggccagtgaatcactgatc
tatccattattttcatggctaccagtggttcgcagtaagcggcagtaccaaatacaactg
tttctcgaagataaattaggtgcgctgattgcgggaaatcaatggtcggatcctgaaacc
atcgaacgtaatatcgataggttgcttaattccgccgagcgcgagcaaacaacctaccgg
cagcagattgactccgcgcatgaaatcgttcttaaagaacagcaggcggctcaggaatgg
cagaggctggcacttgatttagggcatgagggcgacgaggaactgagcttctcacaggca
gatgagctggctgatacgcagattcgcttccctgcattcttactgacgacccactactgg
gaaggtcgttggttgatggatatggccggcattgatgatctgcagaaagaaaagggcaag
aaaggtgctaaaggggtaacagctcgctggcaacgccgaatgaaacttaccccatgcgtg
gtcatgacctgctatatgctgcccggcaatatgcagataagtgaacataaagggcagcgt
aaattcgagaaaagctatttatatgacttcgccgatttactcattgtcgatgaagctggg
caggtgcttcctgaagtggctgctgcctcgtttgccttagctaaaaaggcattagtgatt
ggtgatacggaacagatcccgccaatatggagtattactcctgctattgatataggtaac
atgctggcggaaaaaattctgtcaggcagtacgcaagaggagattactgagaaatatacg
gcaatcgcagagcttggtaaaagcgccgcatctggcagcgtcatgaaaatagcgcagtgt
gcctcacgctatcaatatgatcccgaactggctcgtggaatgtacttatatgaacaccgc
cggtgcttcgataatattattggatactgcaatacgctctgctatcacggtaagttgttg
cctaaaagagggtgtgaagagagcaatttaatgccagcaatgggttatctccatattgat
ggtaaaggagagctggcaagtagcggaagtcgatataatttgctggaggctgaaacgata
gcggcctggctgacagataaccagcaaagtattgaagcgcattatggtaaatcgcttcat
gaagttgtcggtatcgtgacgccttttagtgcgcaggtaccgaccatcaaacaggcgctg
gataaacaaggcatcagcgcaggcaccaatgaaacgtcgctcacggtgggcacagtccat
tctcttcagggcgctgaaagagcgattgttatattctcgccagtctattcaaagcatgaa
gacggcgcgtttattgatagcgataacagcatgctgaatgttgctgtctcccgagctaag
gacagtttcctggtcttcggcgatatggacctgtttgagattcagccagcctcatctccg
cggggattactggcaaaatatctctttgagtcagagaagaatgcgctcacttttgattat
aaagagcgtaaggatttaaaaactgccgagaccaaaatctacacactccatggtgtggag
cagcatgataatttcctgaatcagacgtttgaaaataccgataaacacatcacgatagtt
tctccatggctaacctggcaaaaactggagcaaaccggttttcttgattccatgattacg
gcgtgttcacgtggtattaacgtcacggtagtcactgacagaagctacaacactgaacat
aatgattttgagaagcgaaaagagaagcagcagaaccttaaagcggcgctggagaaactg
aacgcccttggtattgcgacaaaactggtcaatcgtgttcatagcaaaattgttattggt
gatgatggtttgctgtgcgtgggatcgttcaactggtttagcgcgacacgtgaagcgcga
tatgaacgatacgatacatcgatggtttattgcggtgataacctgaagggtgagattgag
gctatttataatagtcttgataggcgtcaggtttag
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integrated database retrieval system
