Salmonella enterica subsp. enterica serovar Typhimurium LT2: STM4579
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Entry
STM4579 CDS
T00065
Symbol
radA
Name
(RefSeq) putative ATP-dependent protease
KO
K04485
DNA repair protein RadA/Sms
Organism
stm
Salmonella enterica subsp. enterica serovar Typhimurium LT2
Brite
KEGG Orthology (KO) [BR:
stm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stm03400
]
STM4579 (radA)
DNA repair and recombination proteins [BR:
stm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
STM4579 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
GvpD_P-loop
Rad51
AAA_22
SLFN-g3_helicase
AAA_14
ABC_tran
AAA_16
NTPase_1
nSTAND3
AAA_24
AAA
DUF7125
cobW
Zeta_toxin
Zn_ribbon_Thio2
AAA_29
DZR
Herpes_Helicase
AAA_5
Viral_helicase1
PAXNEB
Motif
Other DBs
NCBI-GeneID:
1256105
NCBI-ProteinID:
NP_463435
UniProt:
P24517
LinkDB
All DBs
Position
4834294..4835676
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AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV
SKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
EQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKPPEGMLVFGVKKLADALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagctcccaaacgcgcctttgtttgtaatgaatgtggtgccgattacccacgc
tggcaggggcaatgcagcgcctgccatgcctggaacaccattaccgaggtgcgccttgcc
gcgtcgccgacggtggcgcgtaacgaacgtctgagcggatacgccggcagtgcgggcgta
tcaaaagtgcagaaactgtctgacatcagtcttgaggaactgccgcgcttttctaccggt
tttaaagagtttgaccgcgtgctgggcggcggggtggtacccggcagcgccattttgatt
ggcggtaaccccggcgcgggcaaatcaacgttgctgctgcaaacgctgtgcaagctcgcc
gagcagatgaaaacgctgtacgtcaccggcgaagagtcgctacagcaggtggcgatgcgt
gcgcaccgtctcggcctgccgaccgctaatctgaatatgctctccgaaaccagcatcgag
cagatctgcctgatagcggaagaagaacagccgaaactgatggtgatcgactctatacag
gtgatgcatatggcggatatccagtcgtcgccaggcagcgtcgcccaggtccgcgaaacg
gcagcctacctgacgcgcttcgccaaaacgcgcggcgtggcgatcgtgatggtcggccac
gtcaccaaagacgggtcgctggcggggccgaaagtgctggaacactgtatcgattgctca
gtattgctcgacggcgacgctgattctcgtttccgcacgctgcgcagccacaaaaaccgc
tttggcgcagtcaatgagctgggcgtcttcgccatgaccgaacaggggttgcgcgaagtg
agcaatccgtccgccatctttttaagccgtggcgatgaggtcacttccggcagttcagtg
atggtcgtctgggaaggcacgcgaccgttgctggtggagattcaggcgctggtcgatcac
tcgatgatggcgaaccccagacgcgtggcggtcggtctggaacaaaaccgtctggcaatc
ctgctggcggtgctgcaccgacacggcggtctgcaaatgtcggatcaggacgtcttcgtt
aacgtggtcggcggcgtgaaagtcaccgaaaccagcgcggatctggctttactgctggcg
atggtctccagcctgcgtgacaggccgttgccgcaggatctggtggtgtttggcgaagtg
gggctggcaggcgagattcgtccggtgccgagcgggcaggagcgtatttccgaggcggcg
aaacacggctttcgtcgggcgattgtgcctgccgccaacgtaccgaaaaagccgccggaa
ggaatgctggtgttcggtgttaaaaagctcgcagatgcgttaagcgtgtttgacgactta
taa
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