Streptococcus thermophilus ND03: STND_0652
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Entry
STND_0652 CDS
T01978
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
stn
Streptococcus thermophilus ND03
Brite
KEGG Orthology (KO) [BR:
stn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stn03009
]
STND_0652
Enzymes [BR:
stn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
STND_0652
Ribosome biogenesis [BR:
stn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STND_0652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_15
MTS
N6_N4_Mtase
Methyltransf_25
DOT1
PrmA
PCMT
Methyltransf_16
UPF0020
Methyltransf_11
RrnaAD
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADQ62713
LinkDB
All DBs
Position
628912..630273
Genome browser
AA seq
453 aa
AA seq
DB search
MLNKNDIVEVEIVDLTHEGSGVAKVDGFVFFVDNALPGEVIRMRVLKLKKNIGFGKVDEY
VTLSPSRNQDINATYLRSGIADFGHMTYTEQLKFKRKQVVDNLYKTAGISDVEVAETLGM
ETPYAYRNKAQVPVRRVKGQLETGFYRKNSHDLIPIEDFLIQDKEIDKLIVFVRDLLRRY
DLKPYDEKEQTGLIRHLVVRRGHYSGQMMLVFVTTKPKVFRIDQVIAKITEAFPSIVSII
QNINDKNTNAIFGKEFRTLYGQDTITDSMLGNDYEISAQSFYQVNTEMAEKLYQIAIDFS
DLNSDSIVIDAYSGIGTIGLSFAKQVREVYGVEVIETAVEDAKKNAERNGITNAHYVANS
AENAMAKWSQDGIKPDVIIVDPPRKGLTESFIKASVAMQPEKITYVSCNPATMARDIKRY
QELGYELKKVQPVDLFPQTHHIECVGLLTRVER
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaaaacgatattgtagaagttgaaattgtcgatttgacacatgaaggatca
ggcgtagccaaggtcgacggctttgtctttttcgtggataatgccctaccgggtgaagtc
atcagaatgcgtgtgcttaagcttaagaagaatatcggctttggtaaggttgatgagtat
gtgaccctttcaccaagtcgtaatcaggatattaatgctacttatcttcgttcagggatt
gctgattttgggcatatgacttacactgagcagcttaagttcaagcgtaaacaagtcgtc
gataacctctataagacagccggtatctcggacgtagaagttgctgaaacactaggtatg
gaaacaccttacgcctaccgtaataaggcgcaggtgcccgttcgccgtgttaaaggtcag
cttgaaacaggtttctaccgcaagaattcgcacgacttgattccaattgaagatttcctc
attcaagacaaggaaattgataaactcattgtctttgtccgtgaccttctccgtcgttat
gacctcaaaccttatgatgagaaggagcagacaggtttgattcgtcatttggtagttcgt
cgtggtcattattcaggtcagatgatgttggtctttgtaacgaccaaaccaaaagttttc
cgtattgaccaagtcattgctaagattacggaagcctttccaagtattgtttcaatcatt
caaaacatcaacgataagaacactaacgccatctttggtaaggagttccgcaccctttat
ggccaagacaccatcacagacagtatgttgggcaatgactatgagatttctgcccagtct
ttctatcaggttaatactgagatggctgaaaaactctatcaaatagccattgatttctca
gatctaaacagcgacagcattgttattgatgcctattcaggaatcgggacaatcggtttg
tcatttgcgaaacaggtcagggaagtctacggcgttgaagtcatcgaaacagctgttgaa
gatgccaagaaaaatgcagaacgcaacggcattacaaatgcccactatgtggctaactca
gctgaaaatgccatggctaaatggagccaggatggtatcaaaccagatgtcatcattgta
gatccaccacgcaaggggttgacggaaagcttcatcaaagccagcgtcgccatgcaacct
gagaagattacttatgtctcatgtaacccagcaaccatggcgcgtgatatcaaacgctat
caagagttgggctatgaattgaagaaagtacagccggtggatctttttccgcagacgcat
cacatcgagtgtgtaggtctgctcactcgtgtggaacggtga
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