Streptococcus thermophilus ND03: STND_1502
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Entry
STND_1502 CDS
T01978
Name
(GenBank) ATP-dependent RNA helicase, dead/deah box family
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
stn
Streptococcus thermophilus ND03
Pathway
stn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STND_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stn03019
]
STND_1502
03009 Ribosome biogenesis [BR:
stn03009
]
STND_1502
Enzymes [BR:
stn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STND_1502
Messenger RNA biogenesis [BR:
stn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STND_1502
Ribosome biogenesis [BR:
stn03009
]
Prokaryotic type
rRNA helicases
STND_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADQ63539
LinkDB
All DBs
Position
complement(1416861..1418447)
Genome browser
AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEQPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRIIRDFKNGQIDIMVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQSKKKVALKKIERDFADETIRANFDKFKDDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKVGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKNNSRDFENRGNKRPHRASSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaacaaccatcacctatccaagagttgacaattccacttgctcttgaaggtaaggat
gtcatcggtcaggcacaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaattcaagccctggttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggccgtgataagggcgttaaggtt
cgctcagtatacggtggttctagcatcgagaaacaaatcaaggccctccgttcaggtgcc
cacattgtagtagggacaccaggtcgtctcctagaccttatcaaacgtaaagcccttaaa
cttaacaatatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
ctagaagacattgaagcaattatcagtcgagtaccagaggaacgtcaaacccttctcttc
tcagcaactatgcctgatgccatcaaacgtattggtgttcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaggaattgaccaatgttaacgttgatcaatactttatccga
gtgaaggaacaagagaagtttgatactatgactcgtcttatggatgttgaccaacctgaa
ttgtcaatcgtctttggacgtaccaaacgtcgtgtggacgagttgacacgtggtttgaaa
cttcgtggtttccgtgcagaaggtatccacggagaccttgaccaaaacaaacgtcttcgt
attatccgtgacttcaagaacggccaaatcgatatcatggttgcaacagatgttgcggcg
cgtggtcttgacatttcaggtgttactcacgtctacaactacgatattccacaagaccca
gaaagctacgttcatcgtattggacgtacaggccgtgcaggccaatcaggtcaatcgatt
acgttcgtttctccaaacgaaatgggttacttgggcatcatcgaaaatttgactaagaaa
cgcatgaaaggccttaagccaccaacagctcaagaagccttccaatctaagaagaaagtt
gcccttaagaaaattgaacgtgactttgcggatgaaactatccgagctaactttgacaag
tttaaggacgatgctgttaaattggctcaagaattcacacctgaagaattggcgctttat
atcttgagcttgaccgttcaagatccagagacaatgccagaagtggaaattgcgcgtgaa
aaaccattgccatttaaaccatcaggtggtggctttggtggtaaaggtggcaaagttggc
cgtggtaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgt
gatgatcgagacggtggtcgtcgagacttcaaacgcaagtctaagaataacagtcgtgac
ttcgaaaatcgtggcaacaaacgcccacaccgtgcttcaagcgaaaagaaaaatggcttt
gttatccgtaacaagggtgataagtaa
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