Streptococcus thermophilus ND03: STND_1806
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Entry
STND_1806 CDS
T01978
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
stn
Streptococcus thermophilus ND03
Pathway
stn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
stn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STND_1806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stn03021
]
STND_1806
03400 DNA repair and recombination proteins [BR:
stn03400
]
STND_1806
Enzymes [BR:
stn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STND_1806
Transcription machinery [BR:
stn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STND_1806
DNA repair and recombination proteins [BR:
stn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STND_1806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Dehydratase_LU
Motif
Other DBs
NCBI-ProteinID:
ADQ63838
LinkDB
All DBs
Position
complement(1691223..1694834)
Genome browser
AA seq
1203 aa
AA seq
DB search
MQITLASPTKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWECACGKYKRIR
YKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDMSPRALEEVI
YFAAYVVIDPKETPLERKSLLTEREYREKLQEYGQGSFVAKMGAEAIQDLLKQVDLEAEI
AELKEELKTATGQKRFKAVRRLDVLDAFYKSGNKPEWMVLNILPVLPPDLRPMVQLDGGR
FAASDLNDLYRRVINRNNRLARLLELGAPGIIVQNEKRMLQEAVDALIDNGRRGRPITGP
GSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPRLMAIELFKP
FVMREIVAREYAGNVKAAKRMVERGDERIWDILEDVIKEHPVLLNRAPTLHRLGIQAFEP
VLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLLLAAEHILNPKDGKPV
VTPSQDMVLGNYYLTMEDEGREGEGMIFKDIDEAVMAYHNGYVHLHSRVGIAVDSMPDKP
WKENQLHKILVTTVGKILFNSIIPSEIPYLQETTNENLTDSTPDKYFLEPGQDIQTVIDS
LEINAPFKKKHLGNIIAEIFKRLRTTETSAFLDRLKDLGYYYSTLAGLTVGIADIPVIDN
KQEIIDAAHHRVEEINKAFRRGLMTEDDRYVAVTTTWREAKDALEKRLIETQDPKNPIVM
MMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFSTHGARKGMT
DTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETLEERLFGRYT
KKSVKHPETGEVIVGPDTLITEDMAAAIVNAGVEEVTIRSVFTCKTRHGVCRHCYGINLA
TGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQEIFEARNPKG
EAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKVEVGDEVHRGEALTE
GSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRKVRVMDPGDT
DLLPGTLMDISDFTDANKDIVISGGVPATSRPVLLGITKASLETNSFLSAASFQETTRVL
TDAAIRGKKDHLIGLKENVIIGKIIPAGTGMARYRNIEPLAVNEVEVIENIAVDEAIVES
SED
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattacactagcttcaccaactaaggtccgttcatggtcttacggtgaggttaag
aaacctgaaacaatcaactaccgtacgctcaaaccagaacgtgaaggtctgttcgacgaa
gtgatctttggtcctactaaagactgggaatgtgcgtgtgggaaatacaaacgtatccgt
tataaagggatcgtttgtgaccgctgtggtgttgaagtaacacgtgctaaggttcgtcgc
gaacgtatgggtcacatcgagttgaaagcaccagtatcacatatctggtacttcaaggga
atcccttctcgtatgggattgactttggatatgagtcctcgtgcacttgaagaagttatt
tacttcgcagcttacgtggttatcgatccaaaggaaacaccgcttgagcgaaaatctctc
ttgactgaacgtgaatatcgtgaaaaattgcaagagtatggtcagggttcatttgtcgct
aaaatgggtgcagaagctatccaagatctcttgaaacaagtagatttggaagccgaaatt
gctgaactcaaagaagagttgaagacagcaactggtcaaaaacgttttaaagcagttcgt
cgtttggacgttcttgatgccttttacaagtctggtaataaaccagaatggatggtgctt
aacatattgccagtattgccaccagatcttcgtccgatggttcaattggacggtggacgt
tttgcagcatctgacttgaacgacctctaccgtcgtgttatcaaccgtaacaaccgtttg
gctcgtttgcttgagttgggtgctccaggtatcatcgtgcaaaacgaaaaacgtatgttg
caagaagcggtagacgctcttattgataatggacgtcgtggtcgtccaattactggacca
ggtagtcgtccacttaaatctttgagccacatgcttaaaggtaaacaaggtcgtttccgt
caaaacttgcttggtaaacgtgtcgacttctctggccgttccgttattgccgttggtcca
acacttaaaatgtatcaatgtggtgtgccccgtttgatggccatcgaacttttcaaacca
tttgttatgcgtgaaatcgttgcgcgtgaatacgcaggtaacgtgaaagctgctaaacgt
atggttgagcgtggtgatgaacgtatttgggatattcttgaagatgttatcaaggaacac
ccagtgcttcttaaccgcgcacctaccctccaccgtttgggtatccaggcctttgaaccc
gtcttgattgatggtaaggctcttcgtcttcacccattggtatgtgaggcctacaatgcc
gactttgacggtgaccaaatggccatccacgttccattgtctgaagaagctcaagctgaa
gcacgtttgctccttcttgcggcagaacacatccttaaccctaaagacggtaaaccagtc
gtaacaccatctcaggatatggttcttggtaactattacttgacaatggaagatgaaggc
cgtgaaggtgaaggtatgatcttcaaggatattgatgaggcagttatggcttatcataat
ggttatgttcacttgcatagccgtgtaggtattgcagtcgatagcatgcctgataaacct
tggaaagaaaaccaacttcacaaaatcttagtaacaactgttggtaagattctcttcaac
tcaatcattccatcagaaattccatatcttcaagaaacaacaaatgagaacttgacagat
agtacaccagataaatacttccttgaaccgggccaagatatccaaacagttatcgatagt
ttggaaattaatgcgccattcaagaagaaacatcttggtaacatcattgctgaaatcttc
aaacgtcttcgtacaactgaaacatcagctttccttgaccgtttgaaagaccttggttac
tactactcaacacttgctggattgacagtgggtatcgccgatatcccagttattgataac
aaacaagaaattatcgatgctgctcaccaccgtgttgaagaaattaacaaagctttccgt
cgtggtttgatgacagaagatgaccgttatgttgctgttacaacaacatggcgtgaagcg
aaagatgcacttgaaaaacgtctgattgagacacaagatcctaagaatccaatcgttatg
atgatggactcaggagctcgtggtaacatctctaacttctctcaacttgccggtatgcgt
ggtttgatggctgctcctaacggacgtatcatggaattgcctatcctttcaaacttccgt
gaaggtttgagcgttttggaaatgttcttctctactcacggtgcgcgtaaaggtatgacc
gatacagcccttaagactgccgactctggttaccttactcgtcgtttggttgacgttgcc
caagacgttatcattcgtgaagacgattgtggaactgaccgtggtcttgttattcgtgcc
attactgatggtaaagaagtaacagaaactcttgaagaacgtctttttggtcgttacact
aagaaatctgttaaacatcctgaaactggcgaagttatcgttggtccagatactttgatt
actgaagatatggctgcagctattgtcaatgctggtgttgaagaagtaactatccgttca
gtctttacatgtaagactcgtcacggtgtctgtcgtcactgttacggtatcaacttggca
acaggtgatgcggttgaagttggtgaagcagttggtactatcgctgcccaatctatcggg
gaaccaggtacacagcttaccatgcgtaccttccacaccggtggggtagcctcaaacacc
gatatcacacagggtcttccacgtatccaggaaatctttgaagcacgtaaccctaaaggg
gaagcggttatcactgaagttaagggtactgttatcgaaatcgaagaagatgctgcgaca
cgtactaagaaagtcttcgttcaaggtaagactggaatgggtgaatatgtcgttccattt
acagctcgtatgaaagtagaagttggtgacgaagtacaccgtggtgaggccttgacagaa
gggtcaatccaaccgaaacgtctccttgaagtacgtgataccttgtcagttgaaacttat
cttcttgcagaagtgcaaaaagtttaccgtagccaaggggtagaaatcggtgacaaacac
gtcgaagtaatggttcgtcaaatgcttcgtaaagtacgtgttatggatccaggtgataca
gatctccttccaggtacacttatggacatttctgacttcacagatgctaacaaggatatt
gttatctctggtggtgttcctgcaacatctcgtccagtccttcttggtattactaaagcc
tcacttgaaacaaattcattcttatcagcggcttccttccaagaaacgacacgtgtgctt
acagatgcagctatccgtggtaagaaagatcatcttattggtcttaaagaaaatgttatc
attggtaagattatccctgctggtacaggtatggctcgctaccgtaacattgaacctctt
gcagttaacgaagttgaagttattgaaaacattgctgttgatgaagcaattgtggaatca
tctgaagactaa
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integrated database retrieval system
