Sulfurisphaera tokodaii: STK_02100
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Entry
STK_02100 CDS
T00062
Symbol
fen-1
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto03030
DNA replication
sto03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STK_02100 (fen-1)
03410 Base excision repair
STK_02100 (fen-1)
03450 Non-homologous end-joining
STK_02100 (fen-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sto03032
]
STK_02100 (fen-1)
03400 DNA repair and recombination proteins [BR:
sto03400
]
STK_02100 (fen-1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sto04147
]
STK_02100 (fen-1)
DNA replication proteins [BR:
sto03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
STK_02100 (fen-1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
STK_02100 (fen-1)
DNA repair and recombination proteins [BR:
sto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
STK_02100 (fen-1)
Exosome [BR:
sto04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STK_02100 (fen-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
Sigma70_r1_1
DUF2161
DUF3231
Motif
Other DBs
NCBI-ProteinID:
BAK54195
UniProt:
Q976H6
LinkDB
All DBs
Position
233806..234861
Genome browser
AA seq
351 aa
AA seq
DB search
MDLAELVEEIKKELSFAELKGKKISIDAYNALYQFLAAIRQPDGTPLMDSQGRVTSHLNG
LFYRTISILEEGIIPIYVFDGKPPEQKAQELERRKKVKEEAEKKLEQAKTEGSIKTSELK
KYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYDSLL
FGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGTDYN
PDGIKGYGVKTAYRIIKKYGSLEKAIEKGEIPKIKVNFNVEEIRSLFLKPQVVEPKENLE
LVDCDSNKILDILVKTHDFNEERVKNGIERLEKAKREAKGASRQTGLDQWF
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtagatcttgctgagcttgttgaagagataaaaaaggaactatctttcgctgaacttaaa
ggaaagaaaataagtattgatgcatataatgccctttatcaatttttggctgcgataaga
caaccagatggaacaccattaatggatagtcaaggaagagtaactagtcatcttaatgga
ttattttataggactataagtattctggaggagggaattatacccatttatgtttttgat
ggaaaaccaccagaacaaaaagctcaagaattagaacgaagaaaaaaagtaaaagaagaa
gctgaaaagaagttagagcaagccaaaacagaaggaagtataaagactagtgagttaaaa
aaatatgctcaaatgagtattagacttactaacgaaatggctgaagaaagcaaggaatta
ctgaaagctatgggaattccagtagttcaagcaccttcagaaggtgaagcagaggcagca
tatataaatattttaggcttaagttgggcaactgcaagccaggactatgactccctttta
tttggtgctaaaaggttaataagaaatcttactttaagtggtaaaaggaaacttccggga
aaagatgtatatgtagagattaaaccagaactaatagaactagatactttattaaaaaaa
ctgggtttaactagagaacaattaatagacattggcattatagttggaacagattataac
ccagatggaattaaaggctatggcgttaaaaccgcatatagaattattaaaaaatatggt
agtttagaaaaagcaatagaaaaaggagaaataccaaaaattaaagtcaattttaacgtc
gaagagataagaagtctattcctaaaaccacaagtagtagagcctaaggaaaatcttgaa
ttagtagattgtgatagtaataaaatattagatatcctagttaaaacgcacgattttaac
gaggaaagagtaaaaaacgggatagagagattagaaaaagcaaagagagaagcaaaagga
gcttctcgtcagactggacttgatcaatggttttga
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