Sulfurisphaera tokodaii: STK_03225
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Entry
STK_03225 CDS
T00062
Name
(GenBank) RNA splicing endonuclease beta subunit
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sto
Sulfurisphaera tokodaii
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sto03016
]
STK_03225
Enzymes [BR:
sto01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
STK_03225
Transfer RNA biogenesis [BR:
sto03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
STK_03225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Sen15
TLC
Motif
Other DBs
NCBI-ProteinID:
BAK54237
UniProt:
F9VMU0
LinkDB
All DBs
Position
344146..344424
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AA seq
92 aa
AA seq
DB search
MNEDIDMLIIANDLKQRGRKSIISGKFIFINMANEYEYVVYPVNENKTLSVKELEEFVDF
SNRIKKKGVIAIVDKYGDVTYYLLSEINLGKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagatattgatatgttaataatagcaaatgaccttaagcaaagaggaagaaaa
tcgataattagtggaaaatttattttcattaacatggcaaatgagtacgaatacgtggta
tatccggtaaatgaaaataaaaccctcagtgtaaaagaattagaagaatttgtggatttt
tctaatagaattaagaaaaaaggtgtgattgcaatagtggataaatatggtgatgtaaca
tactatttattatccgaaataaatttaggtaaaaagtga
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