Sulfurisphaera tokodaii: STK_03580
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Entry
STK_03580 CDS
T00062
Symbol
endA
Name
(GenBank) RNA splicing endonuclease alpha subunit
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sto
Sulfurisphaera tokodaii
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sto03016
]
STK_03580 (endA)
Enzymes [BR:
sto01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
STK_03580 (endA)
Transfer RNA biogenesis [BR:
sto03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
STK_03580 (endA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
BAK54248
UniProt:
Q975R3
Structure
PDB
PDBj
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All DBs
Position
377162..377704
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AA seq
180 aa
AA seq
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MIGELVKDKILIKNIEDARLIYKMGYYGKPIGISKPKSAEEINSELILSLIEGVYLVKKG
KLEIVSNGERLDFERLYQIGVTQIPRFRILYSVYEDLREKGYVVRSGIKYGADFAVYTIG
PGIEHAPYLVIALDENSQISSNEILGFGRVSHSTRKELILGIVNLTNGKIRYIMFKWLKM
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgataggtgaattagtaaaagataagattcttataaaaaatattgaagatgctagatta
atttataaaatgggatattatggtaaacctattggtatttcaaagcctaaatctgctgaa
gaaataaattctgaactaatattatctttaatagaaggagtatatctggttaagaaaggt
aagttagagattgtttcaaatggtgaaagattagattttgagagattatatcaaatagga
gttacacaaattcctagatttcgtatactctatagtgtttatgaggatttaagagagaaa
ggatatgtagtaagatctggaattaagtatggtgcagactttgccgtttataccataggc
cctggaatcgaacatgctccttatttagttatagctcttgacgagaattctcagatctca
tctaatgagattctaggatttggaagagtttcacacagtaccagaaaagaacttattttg
ggtattgttaatttaactaacggaaaaataagatacataatgtttaaatggttgaagatg
taa
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