Sulfurisphaera tokodaii: STK_03870
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Entry
STK_03870 CDS
T00062
Symbol
pcnA
Name
(GenBank) DNA polymerase sliding clamp A
KO
K04802
proliferating cell nuclear antigen
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto03030
DNA replication
sto03410
Base excision repair
sto03420
Nucleotide excision repair
sto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STK_03870 (pcnA)
03410 Base excision repair
STK_03870 (pcnA)
03420 Nucleotide excision repair
STK_03870 (pcnA)
03430 Mismatch repair
STK_03870 (pcnA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sto03032
]
STK_03870 (pcnA)
03400 DNA repair and recombination proteins [BR:
sto03400
]
STK_03870 (pcnA)
DNA replication proteins [BR:
sto03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
STK_03870 (pcnA)
DNA repair and recombination proteins [BR:
sto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
STK_03870 (pcnA)
MMR (mismatch excision repair)
Other MMR factors
STK_03870 (pcnA)
TLS (translesion DNA synthesis) factors
Other TLS factors
STK_03870 (pcnA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_N
PCNA_C
Rad1
Rad9
Alfin
Motif
Other DBs
NCBI-ProteinID:
BAK54261
UniProt:
Q975N2
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(401910..402647)
Genome browser
AA seq
245 aa
AA seq
DB search
MHIVYDDVRDLKAIIQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIELPKEMFKEYD
VPEEFKFGFNTQYMSKLLKAAKRKEEIIIDADSPEVVKLTLSGALNRVFNVNNIEVLPPE
VPEVNLEFDIKATINASGLKNAIGEIAEVADTLLISGNEEKVVVKGEGENKVEVEFSKDT
GSLADIEFNKESSSAYDVEYLNDIISLTKLSDYVKVAFADQKPMQLEFNMEGGGKVTYLL
APKLS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcatatagtttacgatgacgtaagggatctgaaggctattattcaggctttgcttaaa
ttggttgacgaggctctgtttgacataaaacctgaaggaatacaacttgtagctatagat
aaagctcatatttctttaataaaaatagaacttcctaaagaaatgtttaaagaatatgat
gtaccagaagaattcaagtttggatttaatacacaatatatgagcaaacttttaaaggca
gctaaaagaaaagaggagataattatagatgcagattctccagaagttgtaaagctcact
ttaagtggtgcattaaatagggtatttaacgtaaataacatagaagtattgccaccagag
gtacccgaagtcaatttagaatttgatattaaagccacaattaatgccagtggtttaaag
aatgcaataggcgaaatagccgaagtagcagatacactattaatttcaggtaacgaagaa
aaggttgtagttaagggtgaaggcgaaaataaagtagaagtagaattctcaaaagataca
ggaagtcttgcagacatagaatttaataaggaatcttcttctgcatatgacgtcgaatat
ctaaatgatattatatctcttacgaagctatcagattacgtcaaggtagcatttgcggat
caaaaacctatgcagttggaattcaacatggaaggaggggggaaagttacttatttgctt
gcccccaaattatcctga
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