Sulfurisphaera tokodaii: STK_03970
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Entry
STK_03970 CDS
T00062
Symbol
pcnB
Name
(GenBank) DNA polymerase sliding clamp B
KO
K04802
proliferating cell nuclear antigen
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto03030
DNA replication
sto03410
Base excision repair
sto03420
Nucleotide excision repair
sto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STK_03970 (pcnB)
03410 Base excision repair
STK_03970 (pcnB)
03420 Nucleotide excision repair
STK_03970 (pcnB)
03430 Mismatch repair
STK_03970 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sto03032
]
STK_03970 (pcnB)
03400 DNA repair and recombination proteins [BR:
sto03400
]
STK_03970 (pcnB)
DNA replication proteins [BR:
sto03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
STK_03970 (pcnB)
DNA repair and recombination proteins [BR:
sto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
STK_03970 (pcnB)
MMR (mismatch excision repair)
Other MMR factors
STK_03970 (pcnB)
TLS (translesion DNA synthesis) factors
Other TLS factors
STK_03970 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
WapI
Hus1
DUF7738
pNTSase1
Motif
Other DBs
NCBI-ProteinID:
BAK54265
UniProt:
Q975M2
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(408640..409386)
Genome browser
AA seq
248 aa
AA seq
DB search
MIKATYSSAKDFYSLLSGLLKVTDEIILNFTEDSIFSRYLTDDKVLMVIFKIPKEYLEDY
TIDKPLGIKININDLKKILGKAKSKSATVTLEETEAGLKVTVRDEKTGTRSNIYIKGEKT
SIDQLTEPKVNLSVTFTTDGDVLKDIARDLSLVGEEVEISADENTVTLSTEEAGRTYKSL
LKQDKPLKSLNVESPSKAVYSIEVLKDVFKVTSISQNVTVGFGNNIPMKIEVPTDSGGQL
IFWIAPRL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgattaaggctacatattcaagtgcgaaagatttttactccttgttatctggtctgctt
aaggttacagatgaaataattttaaactttactgaagacagtattttttcaagatatctg
acagatgataaagtactcatggttatatttaaaattccaaaagaatacctagaagattat
acgattgacaaaccacttggaattaaaattaatataaatgatttgaagaaaattcttgga
aaggctaaatctaaaagtgcaacagttactttagaagagactgaggctggcctaaaagtt
actgttagagatgagaaaacagggactagaagcaatatctatataaaaggagaaaaaact
tcaatagaccaattaacagaacctaaggtaaacctaagtgttacatttacaactgatgga
gatgtattaaaggatattgctagagatttaagcttagtaggtgaagaggttgaaatatct
gcagatgaaaacactgttaccctctccacagaagaggctggtagaacatacaagtctttg
ctaaaacaagataagcccctcaaatccttaaatgtagaatctccatcgaaagcagtatat
agcatagaagttctaaaagatgtatttaaagtaacttctatatctcaaaatgtaactgta
ggatttggaaataacatacctatgaaaattgaagtacctacagattctggtggtcaactt
atattctggatagcaccaagactatag
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