Sulfurisphaera tokodaii: STK_04430
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Entry
STK_04430 CDS
T00062
Symbol
rrp41
Name
(GenBank) exosome core subunit Rrp41
KO
K11600
exosome complex component RRP41
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STK_04430 (rrp41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sto03019
]
STK_04430 (rrp41)
Messenger RNA biogenesis [BR:
sto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
STK_04430 (rrp41)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
STK_04430 (rrp41)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BAK54287
UniProt:
Q975G8
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All DBs
Position
complement(450107..450838)
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AA seq
243 aa
AA seq
DB search
MIQLQKPRLILDNGLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKE
MHPRHLALPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILVELFPRT
VIDVFMEVLQADAGTRLVSLMAASMALADAGIPMRDLIAGVAVGKADGVLVLDLNEPEDM
WGEADMPVAMMPSLKQVALLQLNGNMTPQEFRQALEMAQKGIETIYNLEKEAIRSKYAEL
KEE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctacaaaaaccgaggctaatacttgataatggactacgattagacggtaga
aagccagatgaaatgagacctataaagatagaattgggcgttttgaagaatgctgacggc
tcagcaatattcgaaatgggaaatacaaaagttattgcagcagtttatggcccaaaagaa
atgcatcctagacatttagctttgccagatagagccgtattaagagttagataccatatg
actcctttctctactgacgaaagaaaaaatcctgctcctagtcgaagagaaatagaactg
tctaaagtaataagggaagcattagaatcaacaatcttagtagaattatttccaagaact
gttatagatgtattcatggaagttttacaagcagatgcaggaacaagattagtttcttta
atggctgcatctatggctttggctgatgcaggaattcctatgagagacttaatagctggt
gtagcagtaggaaaagcggatggagttttagtattagatttaaacgagccagaagatatg
tggggagaagctgatatgccagtagctatgatgccgtcacttaagcaagttgcgttactc
caactaaatggaaatatgacaccacaagagtttagacaagcattagagatggctcaaaaa
ggaattgaaacaatatataatttagaaaaagaagccattaggagcaaatatgcagaatta
aaggaggaataa
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