Sulfurisphaera tokodaii: STK_04440
Help
Entry
STK_04440 CDS
T00062
Symbol
rrp4
Name
(GenBank) exosome RNA-binding subunit Rrp4
KO
K03679
exosome complex component RRP4
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STK_04440 (rrp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sto03019
]
STK_04440 (rrp4)
Messenger RNA biogenesis [BR:
sto03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
STK_04440 (rrp4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
STK_04440 (rrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_6
RRP4_S1
KH_1
RRP40_S1
S1
Motif
Other DBs
NCBI-ProteinID:
BAB65434
UniProt:
Q975G7
LinkDB
All DBs
Position
complement(450804..451547)
Genome browser
AA seq
247 aa
AA seq
DB search
MSNSKIYFEDRSIVTPGDLIAEGDFQIPWSPYYYKIGNKYYSSITGLIEVKENLFEIVPL
EGHRYIPKVGDTVIGLIEDVEIYGWVLDIKSPYSAYLPASSFLGRPVSPGEDLRRYLNLG
DYVIAKIETYDRTINPILSIKGKGLGRVSSGIVIDIPPVKVPRVIGKNRSMLDTLTSETG
CEILVAQNGRILANCATKMIEEALVEAIQIIEKESHIKGLTEKIRKFLREKLGETKNDSA
TKTEANT
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatagtaagatatattttgaagatagaagcatagtcaccccaggagatttaatt
gccgaaggagactttcaaataccatggtcaccatattattataagataggaaataaatat
tattcgtccataacaggtttaatagaagtcaaggaaaatttatttgagatagttccatta
gaaggacatagatatatcccgaaagttggtgatacagttattggattaatagaagatgtt
gaaatttatggatgggttctggatataaaatcaccttattctgcatacttaccagcttct
tcattcttaggtaggccagttagcccaggagaggacttgcgtagataccttaatttggga
gattacgtaattgctaaaatagaaacctatgatagaacgataaatcctattttatctata
aaagggaaaggtttaggaagagtatctagcggaatagtaattgatatacctccagtaaaa
gtcccgagagtaatcgggaaaaacagaagcatgcttgacacattaactagcgaaacaggc
tgtgaaattcttgttgctcaaaatggaagaatactagctaattgtgctactaagatgatt
gaagaagctttagttgaagctattcagattatagaaaaagaatctcatataaaaggacta
acggaaaaaataagaaagtttttgagagaaaaattaggtgagacaaaaaatgattcagct
acaaaaaccgaggctaatacttga
DBGET
integrated database retrieval system