Sulfurisphaera tokodaii: STK_04980
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Entry
STK_04980 CDS
T00062
Symbol
shdB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sto
Sulfurisphaera tokodaii
Pathway
sto00020
Citrate cycle (TCA cycle)
sto00190
Oxidative phosphorylation
sto00650
Butanoate metabolism
sto00720
Other carbon fixation pathways
sto01100
Metabolic pathways
sto01110
Biosynthesis of secondary metabolites
sto01120
Microbial metabolism in diverse environments
sto01200
Carbon metabolism
Module
sto_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sto_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sto_M00149
Succinate dehydrogenase, prokaryotes
sto_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STK_04980 (shdB)
00650 Butanoate metabolism
STK_04980 (shdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
STK_04980 (shdB)
00720 Other carbon fixation pathways
STK_04980 (shdB)
Enzymes [BR:
sto01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STK_04980 (shdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_9
Fer4_10
Fer4_7
Fer4_16
Fer4_18
Fer4_17
Fer4_2
Fer4_21
Fer4
Fer4_13
Fer4_3
Fer4_4
Fer2
Motif
Other DBs
NCBI-ProteinID:
BAK54308
UniProt:
F9VN11
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All DBs
Position
497128..498090
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AA seq
320 aa
AA seq
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MSLQNEEMDVVLKIKRYSPEKGYWWQEYKLKVDRFTQFTEALRRIKSEQDPTLAYRASCH
MAVCGSCGMKINGEPRLACKTLVIDMAKKYGSNVITIEPMDYFKPVKDLIVDLDEFYQRM
YKVKPRLYPHKEVLEGNVEQRLKPEDQRELWKFAQCIWCGLCVSACPSVKMDPEFLGPAA
HAKGYRFLADPRDTITEERMKILIDSAWRCTYCYMCYNVCPRDIEPVTAIKKTRAYTRLA
KEKTSVAQTGEKHIEAIFNSLVESGKLEEAKVYLSTYGLLGSIKDFIYLFQSGKVKYALV
KEKPVENISEVRKILSGDNK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaaaatgaagagatggatgtagtacttaagataaagagatattctcctgaa
aaaggatattggtggcaagaatataaattaaaagttgatagatttactcaatttaccgag
gctttaagaagaattaaaagtgaacaagatcctacgcttgcatacagagcatcttgtcat
atggcagtttgcggaagttgtggaatgaaaattaatggagaaccaagacttgcatgtaaa
acattagtcattgatatggcaaagaaatacggttctaatgttatcacaatagagccgatg
gattattttaaaccagttaaagatcttattgttgatttagatgaattttatcaaagaatg
tataaagttaaacctagactttatcctcataaggaagttttagaaggtaatgttgaacaa
agattaaaacctgaagatcagagagaactttggaaattcgctcaatgtatatggtgcggg
ctatgtgtatcagcttgtccgagtgttaaaatggatccagaatttttaggtcctgctgct
catgctaaaggttatagattcctagccgatcccagagacacgattactgaagagaggatg
aagattcttatagatagtgcatggcgttgtacatactgttatatgtgctataatgtttgt
ccaagagatatagaacctgtaacagctattaagaaaactagggcttatactagattagct
aaagaaaagacgtcagtagcacaaactggagagaagcatattgaagcaatatttaattct
ctagtagaatctggaaaactagaagaggctaaggtttatctcagtacgtatggattgctt
ggttccataaaagatttcatttatcttttccaatctggtaaagttaagtatgctttagta
aaagagaaaccagttgaaaatataagtgaggtcaggaaaattcttagtggtgataataaa
tga
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