Sulfurisphaera tokodaii: STK_09510
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Entry
STK_09510 CDS
T00062
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sto
Sulfurisphaera tokodaii
Brite
KEGG Orthology (KO) [BR:
sto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sto03016
]
STK_09510 (ligT)
Enzymes [BR:
sto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
STK_09510 (ligT)
Transfer RNA biogenesis [BR:
sto03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
STK_09510 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
BAK54421
UniProt:
F9VNR3
LinkDB
All DBs
Position
924633..925220
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AA seq
195 aa
AA seq
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MIRLFTAVDIPQFPKVLEFMEAVKRTGADVKLVEPYNIHITLVFIGEIQENKLDLVKEAV
ARIDFQSFKIKLKGAGAFPNLSRPRVVWIGIEGGLQQLRTIRGNLLKELLARGIRPEDEK
EFTPHLTIGRVKGPSNMMNLVNVINEYQNIEFGEIIVNKIILFKSTLTPKGPIYDPLLEV
TSNDNRGGSSKENKT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaggctatttacagcagttgatattcctcagtttcctaaagttcttgaatttatg
gaagctgttaaaaggactggcgctgatgtaaaacttgttgaaccatacaatatacatata
actcttgtttttatcggcgaaatccaggaaaataaattagatttagtaaaagaagctgtt
gctagaatagattttcaatccttcaaaataaaactaaaaggagctggtgcatttcctaat
ttatctagacctagagtagtttggataggaattgaaggaggattacagcaattaaggaca
ataagaggtaacttattgaaagaattactagctcgaggcattagaccagaagatgaaaaa
gaatttacccctcacttgacaattggcagagttaaaggtccttcaaatatgatgaattta
gttaatgtgattaatgagtatcagaatatagagtttggagaaattatcgttaataagata
attttatttaagagtaccttaacacctaaaggaccaatatatgacccattactagaagtg
acctctaatgacaatagaggaggaagttctaaagagaataaaacctag
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